Pairwise Alignments

Query, 315 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 418 a.a., sensor histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  130 bits (326), Expect = 7e-35
 Identities = 99/331 (29%), Positives = 150/331 (45%), Gaps = 51/331 (15%)

Query: 4   EAQYQRIYERERKARILAEKLLEEKSRALYDK-VLELQSTLEQLNGAQAQLLQSEKMASV 62
           E  + RI  R+ +  ++A  +   K  A +D+ +L  +  +      QA+  Q+EKMA+V
Sbjct: 114 ETSHFRINGRKFQFEMVASPI---KDPATHDRQILIFKRDVTLQKEFQAKFHQAEKMATV 170

Query: 63  GQLAAGVAHEINNPIGFCLSNLNTLRDYAEVFAQLADFVEQSAPSFEGSEFYQAWMRFKQ 122
           G LAAGVAHE+NNP       L  +  +AE   +    +  S                  
Sbjct: 171 GMLAAGVAHEVNNP-------LTAINGFAEGILRRVKRLRGSV----------------- 206

Query: 123 QHDLAFVREDVLSLVEESASGLHRVKDIVTSLQSVSHSSDGRFAECNLNDCIESALRIVW 182
             DL     D+            R ++IV SL + S      F+  NLN  ++  L+++ 
Sbjct: 207 DPDL---HADLTDYAGTILGECRRCQEIVHSLLTFSRPHSSAFSPVNLNVVVDDTLKLLH 263

Query: 183 NQFKYT----MLVDRQLAENLPKIKGIAPEIQQVLMNMFINASHAC-------------- 224
           N  K      + +D +L    P I G   +++QV++N+ +NA  A               
Sbjct: 264 NHLKQPKYRHVRIDTRLCPTAPVILGCEAQLKQVMLNLLVNALDALEAVAPSAGDSGDDA 323

Query: 225 --DEHGELTITTDTLNEKGKAWVQVQIADNGHGISPEHLAKIFDPFFTTKPVGVGTGLGL 282
             D HG  T        + +      + D G GI  EHL  +F+PFFTTKPVG G G+GL
Sbjct: 324 PPDAHGGKTAVITVAPFRDERHAGFTVRDTGSGIPQEHLHSLFEPFFTTKPVGRGIGIGL 383

Query: 283 SIAFGIVEKHQGKISVTSEVGQGTRFTLLFP 313
           S  + IV +H G ISV S+ G+G+ FT+  P
Sbjct: 384 STCYTIVTEHGGDISVESKEGEGSVFTVTLP 414