Pairwise Alignments

Query, 315 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 632 a.a., ATPase domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  113 bits (282), Expect = 1e-29
 Identities = 94/312 (30%), Positives = 152/312 (48%), Gaps = 36/312 (11%)

Query: 13  RERKARILAEKL---LEEKSRALYDKVLELQSTLEQLNGAQAQLLQSEKMASVGQLAAGV 69
           R  K+    +KL   L E+ R L +    L  +L+ L+  Q QL+++ K++S+G + AGV
Sbjct: 334 RTAKSMFERDKLHDDLTEQQRRLANSNKALAQSLQHLHDTQQQLIETGKLSSLGMMVAGV 393

Query: 70  AHEINNPIGFCLSNLNTLRDYAEVFAQLADFVEQSAPSFEGSEFYQAWMRFKQQHDLAFV 129
           AHE+N P+G  L  L+++++                   E S+   A+    ++ D+   
Sbjct: 394 AHELNTPVGASLMTLSSMKN-------------------ECSKLQSAFETGLKRSDVDTY 434

Query: 130 REDVLSLVEESASGLHRVKDIVTSLQSVSHSSDGRFAEC-NLNDCIESALRIVWNQFK-- 186
            E      E   + L R   +V S + ++    G       L   ++  L   W + K  
Sbjct: 435 FEHFYEGAEIVQANLERAAALVKSFKRLAVDRTGEERRVFKLTSLVQDMLHTSWLRMKKQ 494

Query: 187 -YTMLVDRQLAENLPKIKGIAPEIQQVLMNMFINA-SHACDE--HGELTITTDTLNEKGK 242
            + + +D      L    G    + QVL N+  NA +HA ++  +G++ IT  +L +   
Sbjct: 495 FHELNIDISPEIELNSYPG---ALGQVLENLVSNALTHAFEDVGNGQINITAYSLED--- 548

Query: 243 AWVQVQIADNGHGISPEHLAKIFDPFFTTKPVGVGTGLGLSIAFGIV-EKHQGKISVTSE 301
           A+V + + DNG G+    L +IFDPFFTT+    GTGLGL +A  +V +   G I VTSE
Sbjct: 549 AFVAITVTDNGGGMDDATLKQIFDPFFTTRRGKGGTGLGLHLAHQLVTQLLGGYIKVTSE 608

Query: 302 VGQGTRFTLLFP 313
           +G+GT FTL  P
Sbjct: 609 LGKGTCFTLTIP 620