Pairwise Alignments

Query, 725 a.a., TIGR01666 family membrane protein from Vibrio cholerae E7946 ATCC 55056

Subject, 701 a.a., FIG00956403: hypothetical protein from Pseudomonas fluorescens FW300-N2E2

 Score =  587 bits (1512), Expect = e-172
 Identities = 318/697 (45%), Positives = 433/697 (62%), Gaps = 7/697 (1%)

Query: 24  VLILLTLLGVVIPAWYYQLNTWITPLILGVIAAALADRDDRFSGRLKSIILTLICFAIAA 83
           V + + L G +   WY      + PL LG+IA+ALA+ DD + GRL ++ +TL+CF +AA
Sbjct: 1   VRVFIALTGSMGLCWYLDEMGLLIPLFLGIIASALAETDDSWQGRLNALAVTLVCFTVAA 60

Query: 84  FSIEILFQTPWLFALGLFTSSFGFIMLGAMGARYASIAFASLLVAVYTMLGAHQS----T 139
            S+E+LF  P LF + L  ++FG  MLGA+G RY +IA A+L+++VYTM+G  Q      
Sbjct: 61  LSVELLFPYPVLFIIALALAAFGLTMLGALGERYGAIASATLILSVYTMIGVDQRGGAVN 120

Query: 140 NIWFQPLLLLSGSAWYYLMSMLWHAFWPMQPVQQNLANVFLQLANYLEAKSTLFHPVSNM 199
           + W +PLLL++G+AWY L+S+LW A +  QPVQQ+LA +F +L  YL+ KS+L  P+  +
Sbjct: 121 DFWHEPLLLVTGAAWYGLLSVLWQALFSNQPVQQSLARLFRELGRYLKLKSSLLEPIRQL 180

Query: 200 IPQPHRIIEANLNAATVNALNQCKAVFLTRSKRGHVDSASDRFLNIYFLAQDIHERVSSS 259
             +  R+  A  N   V ALN  K + L R   G   S   R+L +YFLAQDIHER SSS
Sbjct: 181 DVEARRLELAQQNGRVVAALNSAKEIILHRVGNGRPGSKVSRYLKLYFLAQDIHERASSS 240

Query: 260 HYRYQELADHFGRSDILFRFKYLLETQAKACRDIAQSIRLGHSYQHDSASIVALDELQLS 319
           HY Y  LA+ F  SD+LFR + LL  Q KAC+ +A+SI+L   + +D     AL++L  S
Sbjct: 241 HYPYNALAEAFFHSDVLFRCQRLLRQQGKACQALAESIQLRQPFVYDDTFAEALNDLHAS 300

Query: 320 LSYLRQQERRDWKSLLGQLGYLFNNLATVEKQLNNVSNPD-VAKPEEGVLDDTEAHTLGS 378
           L +LR Q    W+ LL  L  L  NLAT+++ L++ SNPD +A   +  L D     L  
Sbjct: 301 LEHLRIQSNPAWRGLLRSLRALSVNLATMDRLLSDASNPDALADATDSSLLDRSPRNLKD 360

Query: 379 MWQRIRANLNKDSLLFRHALRLSITLTLGYAIIQGFGIERGYWILLTTLFVCQPNYAATK 438
           +W R+R  L   SLLFRHALRL + L++GYA++      +GYWI+LTTLFVCQPNY AT+
Sbjct: 361 VWLRLRTQLTPTSLLFRHALRLPLALSVGYAMVHLIHPSQGYWIILTTLFVCQPNYGATR 420

Query: 439 QKLTARIIGTLAGLLIGVPLLTFFPSQESQLVFIVFSGVMFFAFRLNNYGYATGFITLLV 498
           +KL  RIIGT  GL +   L   FP+   Q  F + +GV+FF  R   Y  AT  IT++V
Sbjct: 421 RKLGQRIIGTAIGLTVAWALFDLFPNPLVQSSFAIAAGVVFFTNRTTRYTLATAGITIMV 480

Query: 499 LFCFNQLGEGYAVVLPRLADTLIGCALAVAAVVLILPDWQSKRLHKVMAEAIDANKQYLA 558
           LFCFNQ+G+GY ++LPRL DTL+G  +A  AV L LPDWQ +RL+KV+A  +  N  YL 
Sbjct: 481 LFCFNQVGDGYGLLLPRLFDTLLGSLIAGLAVFLFLPDWQGRRLNKVLANTLTCNSIYLR 540

Query: 559 QIIGQYRIGKKDSLSYRIARRHAHNQDAALSAAVTNMLAEPGRYRAAADESFRFLTLNHA 618
           QI+ QY  GK D L+YR+ARR+AHN DAALS  + NML EPG +R  AD  FRFL L+H 
Sbjct: 541 QIMQQYAAGKSDDLAYRLARRNAHNADAALSTTLANMLMEPGHFRKEADVGFRFLVLSHT 600

Query: 619 LLSYISALGAHR-TRLDDETVHQLVLDSHRVIHQHLDLLHQQLSNHCEECDTSGIDSSGL 677
           LLSY+S LGAHR T L  E   QL+  +   +   +D + Q L++  +       +   L
Sbjct: 601 LLSYLSGLGAHRGTELPTEVREQLIDGAGVKLAASIDEIAQGLASK-QPIAIQSDEEEAL 659

Query: 678 EKRLAEWREDDEGSARMVLQQLHLIYRMLPELHTLAS 714
              L    ++ +   R+V  QL LI R L  L TLA+
Sbjct: 660 ASELERMPDEIDEGQRLVQTQLALICRQLGPLRTLAA 696