Pairwise Alignments

Query, 725 a.a., TIGR01666 family membrane protein from Vibrio cholerae E7946 ATCC 55056

Subject, 732 a.a., hypothetical membrane protein, TIGR01666 from Pseudomonas stutzeri RCH2

 Score =  612 bits (1578), Expect = e-179
 Identities = 324/714 (45%), Positives = 459/714 (64%), Gaps = 7/714 (0%)

Query: 6   PKINQ-LRLYWANKTVNYSVLILLTLLGVVIPAWYYQLNTWITPLILGVIAAALADRDDR 64
           P ++Q LR  WA +   YS+ +L+ + G +  +WY    T I PL LG+IA+ALA+ DD 
Sbjct: 4   PSLSQSLRRLWALEKFGYSLRVLIAMAGSMGLSWYLGQPTLIIPLFLGIIASALAETDDS 63

Query: 65  FSGRLKSIILTLICFAIAAFSIEILFQTPWLFALGLFTSSFGFIMLGAMGARYASIAFAS 124
           + GRL ++++TL+CF+IAA ++E+LF  PWLF  GL  S+F  +MLGA+G RY +IA A+
Sbjct: 64  WLGRLNALLVTLLCFSIAAVAVELLFPYPWLFVAGLAVSTFALVMLGALGERYGAIAQAT 123

Query: 125 LLVAVYTMLGAHQST----NIWFQPLLLLSGSAWYYLMSMLWHAFWPMQPVQQNLANVFL 180
           L++A+Y+M+ A Q      + W  PLLL++G+AWY L+S+ W+A +  QPVQQ+LA ++ 
Sbjct: 124 LILAIYSMIAADQRNGELQHFWRDPLLLVAGAAWYGLLSVCWNALFAHQPVQQSLARLYR 183

Query: 181 QLANYLEAKSTLFHPVSNMIPQPHRIIEANLNAATVNALNQCKAVFLTRSKRGHVDSASD 240
           +L  Y   K+ LF PV  +  +  R+  A  N   VNALN  K   L R   G      +
Sbjct: 184 ELGLYFRYKAALFEPVRQLDVEQRRLELAQQNGRVVNALNAAKETLLHRLGNGRAGGKIN 243

Query: 241 RFLNIYFLAQDIHERVSSSHYRYQELADHFGRSDILFRFKYLLETQAKACRDIAQSIRLG 300
            +L +YFLAQD+HERVSSSHY YQ LA+ F  SD+LFR + LL  QA AC ++ ++I+L 
Sbjct: 244 HYLKLYFLAQDLHERVSSSHYPYQALAEAFFHSDVLFRCQRLLRLQASACAELGETIQLR 303

Query: 301 HSYQHDSASIVALDELQLSLSYLRQQERRDWKSLLGQLGYLFNNLATVEKQLNNVSNPDV 360
            ++++  A+  AL++LQ SL +LR+Q    W+ LL  L  L  NL+T+++QL + S+P  
Sbjct: 304 QAFRYSEANGQALEDLQASLEHLREQNNPAWRGLLRSLRALSGNLSTLQRQLASASDPGT 363

Query: 361 AKPEE-GVLDDTEAHTLGSMWQRIRANLNKDSLLFRHALRLSITLTLGYAIIQGFGIERG 419
            + E+   L D +  TL   + RIR  L   SLLFRHALR++I L  GYA++     E+G
Sbjct: 364 LEGEQDNSLLDRQPQTLREAFNRIRLQLTPTSLLFRHALRMTIALITGYAVLHAIHPEQG 423

Query: 420 YWILLTTLFVCQPNYAATKQKLTARIIGTLAGLLIGVPLLTFFPSQESQLVFIVFSGVMF 479
           YW+LLTT+FVCQPNY AT+ KL  RI GT+ GL+ G  L   FPSQ  Q +F V +GV+F
Sbjct: 424 YWVLLTTVFVCQPNYGATRIKLVQRISGTVLGLVAGWALFDLFPSQPIQALFAVVAGVVF 483

Query: 480 FAFRLNNYGYATGFITLLVLFCFNQLGEGYAVVLPRLADTLIGCALAVAAVVLILPDWQS 539
           FA R   Y  AT  ITL+VLFCFNQ+G+GY ++ PRL DTL+G  +A AAV LILPDWQ 
Sbjct: 484 FATRSTRYTLATAAITLMVLFCFNQVGDGYGLIWPRLFDTLLGSLIAAAAVFLILPDWQG 543

Query: 540 KRLHKVMAEAIDANKQYLAQIIGQYRIGKKDSLSYRIARRHAHNQDAALSAAVTNMLAEP 599
           +RL++V+A  +  N  YL QI+ QY  GK+D L+YR+ARR+AHN DAALS  ++NML EP
Sbjct: 544 RRLNQVVANTLSCNSDYLRQIMRQYDSGKRDDLAYRLARRNAHNADAALSTTLSNMLLEP 603

Query: 600 GRYRAAADESFRFLTLNHALLSYISALGAHRTRLDDETVHQLVLDSHRVIHQHLDLLHQQ 659
           G +R  A+  FRFL L+H LL+Y+S LGAHR  L D+    L+  + + +   LD L   
Sbjct: 604 GHFRKDAETGFRFLILSHTLLNYLSGLGAHRESLPDDARDALLESAAQQLAASLDDLAAA 663

Query: 660 LSNHCEECDTSGIDSSGLEKRLAEWREDDEGSARMVLQQLHLIYRMLPELHTLA 713
           L+ +         +   L ++L +  ++ + + R+V  QL LI R L  L ++A
Sbjct: 664 LAQN-RPIAIYSEEEEALAQQLEQTPDEMDDAHRLVQTQLGLICRQLAPLRSMA 716