Pairwise Alignments

Query, 725 a.a., TIGR01666 family membrane protein from Vibrio cholerae E7946 ATCC 55056

Subject, 732 a.a., Intergral membrane protein, YccS:Integral membrane protein, YccS/YhfK from Pseudomonas syringae pv. syringae B728a

 Score =  582 bits (1501), Expect = e-170
 Identities = 317/709 (44%), Positives = 434/709 (61%), Gaps = 7/709 (0%)

Query: 12  RLYWANKTVNYSVLILLTLLGVVIPAWYYQLNTWITPLILGVIAAALADRDDRFSGRLKS 71
           R  WA    +YSV + + L G +   WY      + PL LG+IA ALA+ DD + GRL +
Sbjct: 11  RRLWALDKFSYSVRVFIALTGSMALCWYQNEMALLIPLFLGIIACALAETDDSWQGRLNA 70

Query: 72  IILTLICFAIAAFSIEILFQTPWLFALGLFTSSFGFIMLGAMGARYASIAFASLLVAVYT 131
           + +TL+CF+IAA ++E+LF  P LF   L  +SF   MLGA+G RY +IA+ +L+++VYT
Sbjct: 71  LAVTLVCFSIAALAVELLFPYPILFVCSLALASFCLTMLGALGERYGAIAYGTLILSVYT 130

Query: 132 MLGAHQS----TNIWFQPLLLLSGSAWYYLMSMLWHAFWPMQPVQQNLANVFLQLANYLE 187
           M+G  Q      + W +P+LL++G+AWY L+S+LW   +  QPVQQ LA +F +L  YL+
Sbjct: 131 MIGVDQRGGEVLDFWHEPMLLVAGAAWYGLLSVLWQMLFSNQPVQQALARLFRELGQYLK 190

Query: 188 AKSTLFHPVSNMIPQPHRIIEANLNAATVNALNQCKAVFLTRSKRGHVDSASDRFLNIYF 247
            KSTLF P+  +  +  R+  A  N   V ALN  K + L R   G   S   R+L +YF
Sbjct: 191 LKSTLFEPIRTLNVEARRLELAQQNGKVVAALNSTKEIILHRVGSGRPGSKVSRYLKLYF 250

Query: 248 LAQDIHERVSSSHYRYQELADHFGRSDILFRFKYLLETQAKACRDIAQSIRLGHSYQHDS 307
           +AQDIHER SSSHY Y  LAD F  SD+LFR + LL  Q  AC+ +++SI+L   + +D 
Sbjct: 251 IAQDIHERASSSHYPYNSLADAFFHSDVLFRCQRLLRQQGVACQALSESIQLRQPFVYDP 310

Query: 308 ASIVALDELQLSLSYLRQQERRDWKSLLGQLGYLFNNLATVEKQLNNVSNPD-VAKPEEG 366
           +   A+++L  SL +LR Q    W+ LL  L  L  NL T+++ +++ SNPD VA   + 
Sbjct: 311 SFAEAMEDLHASLEHLRIQSNPAWRGLLRSLRALAANLGTLDRLISDASNPDAVADATDS 370

Query: 367 VLDDTEAHTLGSMWQRIRANLNKDSLLFRHALRLSITLTLGYAIIQGFGIERGYWILLTT 426
            L D     L  +W R+R  +   SLLFRHALRL + LT+GYA++      +GYWI+LTT
Sbjct: 371 SLLDRSPRNLKDVWTRLRLQMTPTSLLFRHALRLPLALTIGYAMVHLIHPSQGYWIILTT 430

Query: 427 LFVCQPNYAATKQKLTARIIGTLAGLLIGVPLLTFFPSQESQLVFIVFSGVMFFAFRLNN 486
           +FVCQP+Y AT+ KL  RIIGT  GL +G  L     S   Q +  V +GV+FF  R   
Sbjct: 431 VFVCQPSYGATRLKLGQRIIGTAIGLTVGWVLFDLVTSPILQSMCAVLAGVVFFVNRTTR 490

Query: 487 YGYATGFITLLVLFCFNQLGEGYAVVLPRLADTLIGCALAVAAVVLILPDWQSKRLHKVM 546
           Y  +T  IT++VLFCFNQ+G+GY + LPRL DTL+G  +A  AV L LPDWQ +RL+KV+
Sbjct: 491 YTLSTAAITVMVLFCFNQVGDGYGLFLPRLFDTLLGSLIAGLAVFLFLPDWQGRRLNKVL 550

Query: 547 AEAIDANKQYLAQIIGQYRIGKKDSLSYRIARRHAHNQDAALSAAVTNMLAEPGRYRAAA 606
           A  +  N  YL QI+ QY  GK D L+YR+ARR+AHN DAALS  + NML EPG +R  A
Sbjct: 551 ANTLTCNSIYLRQIMQQYAKGKSDDLAYRLARRNAHNADAALSTTLANMLMEPGHFRKEA 610

Query: 607 DESFRFLTLNHALLSYISALGAHR-TRLDDETVHQLVLDSHRVIHQHLDLLHQQLSNHCE 665
           D  FRFL L+H LLSY+S LGAHR T+L  +    L+ +    +   +D +   L+    
Sbjct: 611 DVGFRFLVLSHTLLSYLSGLGAHRDTQLPSDVREHLIDNVGATLAASIDEIAAGLAEKKP 670

Query: 666 ECDTSGIDSSGLEKRLAEWREDDEGSARMVLQQLHLIYRMLPELHTLAS 714
               S  +  GL  +L +  ED + S R+V  QL LI R L  L TLA+
Sbjct: 671 VAVQSDAE-EGLAAQLEQLPEDMDESQRLVQAQLALICRQLAPLRTLAA 718