Pairwise Alignments

Query, 687 a.a., DNA helicase IV from Vibrio cholerae E7946 ATCC 55056

Subject, 689 a.a., UvrD2 DNA helicase from Sinorhizobium meliloti 1021

 Score = 82.0 bits (201), Expect = 9e-20
 Identities = 107/391 (27%), Positives = 169/391 (43%), Gaps = 62/391 (15%)

Query: 216 LVLAGAGSGKTSVLTARVSYLLQSHLAKPEQILLVAFARDAAQEMAERLKN--------K 267
           L++AGAGSGKT+ L  RV++L+ +  A P +ILL+ F+R AA EM+ R++          
Sbjct: 34  LIIAGAGSGKTNTLAHRVAHLIVNG-ADPRRILLMTFSRRAAAEMSRRVERICAQVLGRS 92

Query: 268 IGLEAERLH-INTFHQLGLRIINRVEGKTVIMSPLANDSKLKQAWCIDWLKRHWM----T 322
            G+  + L    TFH +G R++     +  + +      +   A  I+ L RH +    T
Sbjct: 93  SGMMTDALSWAGTFHGIGARLLRIYAEQIGLNAEFTIHDREDSADLIN-LIRHELGFSKT 151

Query: 323 PTNFKRWQKHLAKWPIAYLAGDDELGSHVEN--PKLIAWLEKQLDQLAQMGLSKKELQER 380
            + F      LA +     A +  L   + +  P +  W E+QL +L    +  K+ Q  
Sbjct: 152 ESRFPTKGTCLAIYSRTVNA-EMRLNEVLRSWYPWVAGW-EQQLQELFAGYVEAKQAQN- 208

Query: 381 LVDHDDYPRLNSELSLCWPCYQAWQQMLKDQNQIDFNIMITRATEYVEKGKFRSPWKFIM 440
           ++D+DD                 W QM+ D +  D                  + + +++
Sbjct: 209 VLDYDDL-------------LLYWAQMVSDASLAD---------------DIGNRFDYVL 240

Query: 441 VDEYQDISPQRLRLLQALCEQNQGQCNLFAVGDDWQSIYQFAGSDVDLTTGFASRFAHST 500
           VDEYQD +  +  +L AL    +G   L  VGDD QSIY F  + V     F  +FA + 
Sbjct: 241 VDEYQDTNKLQSSVLLALKPDGRG---LTVVGDDAQSIYSFRAATVRNILDFPKQFAPAA 297

Query: 501 -VHHLDTTYRFNDQIGAVANRFIQQNPHQLPKTLNSFKTQKQKAVMLA-------PNHSV 552
            +  LD  YR    I A AN  I     +  K L + +   ++  +L         N  V
Sbjct: 298 EIVTLDRNYRSTQPILAAANGVIDLARERFTKNLWTDRESAERPKLLTVKDEADQANCIV 357

Query: 553 EKILDEINRSTNK-LKTVLLLGRNHYHKPEL 582
           E++L   NR +   LK   +L R   H   L
Sbjct: 358 EQVL--ANRESGMLLKQQAVLFRTSSHSGPL 386



 Score = 35.8 bits (81), Expect = 7e-06
 Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 10/63 (15%)

Query: 599 TCHASKGKEADYVIILAVDEGQFPARVKALHLDDALNQSEDDFPYAEERRLFYVALTRAK 658
           T H++KG+E   V +L V +G  P+       D A   S +     EERRL YV +TRAK
Sbjct: 567 TIHSAKGQEWRSVFMLNVVDGCIPS-------DLATGTSHE---LEEERRLLYVGMTRAK 616

Query: 659 EKV 661
           +++
Sbjct: 617 DQL 619