Pairwise Alignments

Query, 687 a.a., DNA helicase IV from Vibrio cholerae E7946 ATCC 55056

Subject, 735 a.a., DNA/RNA helicase, superfamily I from Dechlorosoma suillum PS

 Score =  106 bits (265), Expect = 3e-27
 Identities = 103/348 (29%), Positives = 154/348 (44%), Gaps = 56/348 (16%)

Query: 200 LNVSQQYAVLLNDDHNLVLAGAGSGKTSVLTARVSYLLQSHLAKPEQILLVAFARDAAQE 259
           LN  Q  AV L   H L+LAGAGSGKT VLT R+++L+ +    P  +L V F   AA+E
Sbjct: 8   LNPEQLQAVTLPPQHALILAGAGSGKTRVLTTRIAWLISTGQMGPHAVLAVTFTNKAAKE 67

Query: 260 MAERLKNKIGLEAERLHINTFHQLGLRII---NRVEGKTVIMSPLANDSKLKQAWCIDWL 316
           M  RL   + +    + I TFH L  R++   ++  G   +   L +  +L         
Sbjct: 68  MLARLSAMLPINTRGMWIGTFHGLCNRLLRAHHKEAGLPSLFQILDSADQL--------- 118

Query: 317 KRHWMTPTNFKRWQKHLAKWPIAYLAGDDELGSHVENPKLIAWLEKQLDQLAQMGLSKKE 376
                  +  KR  K+L          DDE        +L+ ++    DQ    GL   +
Sbjct: 119 -------SAIKRLLKNLNV--------DDE---KFPPRELMHFINAHKDQ----GLRPAQ 156

Query: 377 LQERLVDHDDYPRLNSELSLCWPCYQAWQQMLKDQNQIDFNIMITRATEYVEKGK----- 431
            +      DDY R   EL   W  Y+   Q    +  +DF  ++ R  E + + +     
Sbjct: 157 AEV----WDDYTRRRVEL---WAEYEGQCQR---EGVVDFAELLLRTYELLSRNEPLRRH 206

Query: 432 FRSPWKFIMVDEYQDISPQRLRLLQALCEQN------QGQCNLFAVGDDWQSIYQFAGSD 485
           ++  ++ I+VDE+QD +  +   L+ L   +      QG   +FAVGDD QSIY F G++
Sbjct: 207 YQERFRHILVDEFQDTNRLQYAWLKLLAGHDGSAGAPQGAA-VFAVGDDDQSIYAFRGAE 265

Query: 486 VDLTTGFASRFAHSTVHHLDTTYRFNDQIGAVANRFIQQNPHQLPKTL 533
           V     F   F    V  L+  YR +  I   AN  I+ N  +L K L
Sbjct: 266 VGNMRDFEREFGVQNVIRLEQNYRSHGNILDAANALIKNNQGRLGKNL 313



 Score = 50.4 bits (119), Expect = 3e-10
 Identities = 26/71 (36%), Positives = 45/71 (63%), Gaps = 10/71 (14%)

Query: 595 LDFMTCHASKGKEADYVIILAVDEGQFPARVKALHLDDALNQSEDDFPYAEERRLFYVAL 654
           +  MT HA+KG E D V I  +++G FP      H +  + +S ++    EERRL YVA+
Sbjct: 562 VQLMTVHAAKGLEFDVVFISGLEQGLFP------HENSVMEKSGEE----EERRLMYVAI 611

Query: 655 TRAKEKVWVTY 665
           TRA++++++++
Sbjct: 612 TRARQRLYMSH 622