Pairwise Alignments

Query, 687 a.a., DNA helicase IV from Vibrio cholerae E7946 ATCC 55056

Subject, 669 a.a., DNA/RNA helicase, superfamily I from Dechlorosoma suillum PS

 Score = 97.8 bits (242), Expect = 1e-24
 Identities = 98/341 (28%), Positives = 145/341 (42%), Gaps = 51/341 (14%)

Query: 200 LNVSQQYAVLLNDDHNLVLAGAGSGKTSVLTARVSYLLQSHLAKPEQILLVAFARDAAQE 259
           LN  Q+ A+   D   LVLAGAGSGKT V+T +++YL+Q     P  I  + F   AA+E
Sbjct: 10  LNPPQREAIYYLDGPLLVLAGAGSGKTRVITQKIAYLIQECGMNPANIAAITFTNKAARE 69

Query: 260 MAERLKNKI-GLEAERLHINTFHQLGLRIINRVEGKTVIMSPLANDSKLKQAWCIDWLKR 318
           M ER+   + G     L I TFH LG+RI+ R E K +   P  +       + I     
Sbjct: 70  MQERVGQLLQGGSTAGLTICTFHSLGVRIL-REEAKALGYKPKFSIFDSTDCYSIFADLS 128

Query: 319 HWMTPTNFKRWQKHLAKWPIAYLAGDDELGSHVENPKLIAWLEKQLDQLAQMGLSKKELQ 378
             +     +  Q  ++ W  A                      K  DQ A    S+ E+ 
Sbjct: 129 ASVDKATIRSIQWLVSGWKNAM---------------------KSPDQAAAEAKSEIEV- 166

Query: 379 ERLVDHDDYPRLNSELSLCWPCYQAWQQMLKDQNQIDFNIMITRATE-YVEKGKFRSPW- 436
                            L    Y+ +   LK    +DF+ +I    + + E  K R  W 
Sbjct: 167 -----------------LAAKAYRDYAATLKAYQAVDFDDLILLPMQLFQEHPKIRDKWQ 209

Query: 437 ---KFIMVDEYQDISPQRLRLLQALCEQNQGQCNLF-AVGDDWQSIYQFAGSDVDLTTGF 492
              ++++VDEYQD +  + +LL+ L     G   +F AVGDD Q+IY + G+DV+   G 
Sbjct: 210 NRLRYLLVDEYQDTNACQYQLLKLL----TGPRAMFTAVGDDDQAIYGWRGADVENLRGL 265

Query: 493 ASRFAHSTVHHLDTTYRFNDQIGAVANRFIQQNPHQLPKTL 533
              + +  +  L+  YR   +I   AN  I  N     K L
Sbjct: 266 PRDYPNLKLIMLEQNYRSTARILQAANNVIGNNEKLFEKKL 306



 Score = 38.5 bits (88), Expect = 1e-06
 Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 22/92 (23%)

Query: 599 TCHASKGKEADYVIILAVDEGQFPARVKALHLDDALNQSEDDFPYAEERRLFYVALTRAK 658
           T HA+KG E   V ++ V+EG  P            + S +     EERRL YV +TRA+
Sbjct: 556 TLHAAKGLEYKNVFLVGVEEGILPH-----------SSSVESGTVEEERRLMYVGITRAR 604

Query: 659 EKVWVT-----------YNGNGSSFVQELLND 679
           + + ++           Y    S F+ E+ ND
Sbjct: 605 QHLHLSWCEKRKQGKEMYPCEPSRFIAEMGND 636