Pairwise Alignments

Query, 687 a.a., DNA helicase IV from Vibrio cholerae E7946 ATCC 55056

Subject, 684 a.a., DNA helicase IV from Klebsiella michiganensis M5al

 Score =  386 bits (991), Expect = e-111
 Identities = 254/693 (36%), Positives = 369/693 (53%), Gaps = 17/693 (2%)

Query: 1   MQLNANKTAQFFIANEYYQVQLEKEWLVLTSLSSEERIPFHVWNGEVQIRRGVFWGTLQF 60
           M+L A    +    + Y +VQL    + ++  S E  IPF+     +  +RG+ WG L+F
Sbjct: 1   MELRATTLGKRMAQHPYDRVQLLNAGVKVSGDSHEYLIPFNQLLS-IHCKRGLVWGELEF 59

Query: 61  FAHPEEGVQRSWLVQGLPWPECRHFAHQLVAHYQAWHNRQCEQLSLYFPRWQQELSRLKR 120
               E+ V+    + G  W E + F H L   +Q W     +  +    +   +++R   
Sbjct: 60  ILPGEKVVR----LHGTEWNETQRFYHHLNTLWQQWSEEMSDIAADVLRQQLADVARSSA 115

Query: 121 LPSFLSHSSV---EAWVAQVYADLKLMDMTLHEAQKHLPTVFDTLLPWLLDTSATLYERN 177
              +L+   V   +  +      L +    L +A  +   ++     WL +T     E N
Sbjct: 116 EGKWLTRQQVTDIQRKIRHALGGLPVPTARL-DAFDNCRELWRQCQSWLSNTEKARLEHN 174

Query: 178 KAWLEIERANWTVLFSQCESSPLNVSQQYAVLLNDDHNLVLAGAGSGKTSVLTARVSYLL 237
           + + E     +   F+  ESSPLN +Q  AV+  +   LVLAGAGSGKTSVL AR  +LL
Sbjct: 175 QTFTESMLEQYRGFFAAVESSPLNPAQARAVVNGERSLLVLAGAGSGKTSVLVARAGWLL 234

Query: 238 QSHLAKPEQILLVAFARDAAQEMAERLKNKIGLEAERLHINTFHQLGLRIINRVEGKTVI 297
               A  EQILL+AF R AAQEM ER++ ++G   E +   TFH L L II +   K   
Sbjct: 235 TRGEAAAEQILLLAFGRQAAQEMDERIRERLG--TEEISTRTFHSLALYIIQQGSKKAPT 292

Query: 298 MSPLANDSKLKQAWCI-DWLKRHWMTPTNFKRWQKHLAKWPIAYLAGDDELGSHVENPKL 356
           +S L NDS  +Q   + +W ++        K W+  L +     +   D         ++
Sbjct: 293 ISKLENDSAARQKLLVQNWQQQCQEKKAQAKGWRLWLEEEMDWQIPEGDFWQDKTLQRRI 352

Query: 357 IAWLEKQLDQLAQMGLSKKELQERLVDHDDYPRLNSELSLCWPCYQAWQQMLKDQNQIDF 416
            + L++ +  +   G S+ E+     + +        + L  P  +AW+  LKD+N +DF
Sbjct: 353 ASRLDRWVSLMRMHGGSQAEMIAGAPE-EVRDLFGKRVKLMAPLLKAWKTALKDENAVDF 411

Query: 417 NIMITRATEYVEKGKFRSPWKFIMVDEYQDISPQRLRLLQALCEQNQGQCNLFAVGDDWQ 476
           + +I +A   ++KG+F SPWK I+VDE+QDISPQR  LL AL  QN  Q  LFAVGDDWQ
Sbjct: 412 SGLIHQAINVLDKGRFVSPWKHILVDEFQDISPQRASLLAALRRQNT-QTTLFAVGDDWQ 470

Query: 477 SIYQFAGSDVDLTTGFASRFAHSTVHHLDTTYRFNDQIGAVANRFIQQNPHQLPKTLNSF 536
           +IY+F+G+ + LTT F   F       LDTTYRFN +IG VAN FIQQNPHQL K LNS 
Sbjct: 471 AIYRFSGAQLSLTTAFNHYFGEGDCCALDTTYRFNSRIGEVANGFIQQNPHQLTKPLNSL 530

Query: 537 KTQKQKAVMLAPNHSVEKILDEINRSTNKLKTVLLLGRNHYHKPELLKDWQNRYLSLKLD 596
               +KAV L     ++ +LD+++    + + +LLL R H+ KP  L+    R+  L LD
Sbjct: 531 VAGDKKAVTLLAQDKLDDLLDKMSGYVKREQRILLLARYHHLKPAALEKAATRWPHLHLD 590

Query: 597 FMTCHASKGKEADYVIILAVDEGQ--FPARVKALHLDDALNQSEDDFPYAEERRLFYVAL 654
           FMT HASKG++ADYVIIL + EG   FPA  +   ++ AL    +DFP AEERRL YVA+
Sbjct: 591 FMTIHASKGQQADYVIILGLQEGDDAFPAPARESIMEQALLPQPEDFPDAEERRLLYVAI 650

Query: 655 TRAKEKVWVTYN-GNGSSFVQELLNDDYPVVKQ 686
           TRA+ +VW+ +N    S FV+ L     PV ++
Sbjct: 651 TRARLRVWLLFNKEQPSPFVEMLEALGVPVARK 683