Pairwise Alignments

Query, 687 a.a., DNA helicase IV from Vibrio cholerae E7946 ATCC 55056

Subject, 720 a.a., DNA-dependent helicase II from Klebsiella michiganensis M5al

 Score = 92.0 bits (227), Expect = 9e-23
 Identities = 92/341 (26%), Positives = 142/341 (41%), Gaps = 49/341 (14%)

Query: 200 LNVSQQYAVLLNDDHNLVLAGAGSGKTSVLTARVSYLLQSHLAKPEQILLVAFARDAAQE 259
           LN  Q+ AV  +  + LVLAGAGSGKT VL  R+++LL      P  I+ V F   AA E
Sbjct: 10  LNDKQREAVAASRTNMLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSIMAVTFTNKAAAE 69

Query: 260 MAERLKNKIGLEAERLHINTFHQLGLRIINRVEGKTVIMSPLANDSKLKQAWCIDWLKRH 319
           M  R+   +G     + + TFH L  R++        + + L  D ++  +     L + 
Sbjct: 70  MRHRIGQLMGTTQGGMWVGTFHGLAHRLLRAHH----LDANLPQDFQILDSEDQLRLLKR 125

Query: 320 WMTPTNF--KRWQKHLAKWPIAYLAGDDELGSHVENPKLIAWLEKQLDQLAQMGLSKKEL 377
            +   N   K+W    A W   Y+ G  + G     P  I      ++Q  Q        
Sbjct: 126 LIKAMNLDEKQWPPRQAMW---YINGQKDEGL---RPHHIQSYGNPVEQTWQ-------- 171

Query: 378 QERLVDHDDYPRLNSELSLCWPCYQAWQQMLKDQNQIDFNIMITRATE-YVEK----GKF 432
                                  YQA+Q+       +DF  ++ RA E ++ K      +
Sbjct: 172 ---------------------KVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHY 210

Query: 433 RSPWKFIMVDEYQDISPQRLRLLQALCEQNQGQCNLFAVGDDWQSIYQFAGSDVDLTTGF 492
           R  +  I+VDE+QD +  +   ++ L         +  VGDD QSIY + G+ V+    F
Sbjct: 211 RERFTNILVDEFQDTNNIQYAWIRLLAGDTG---KVMIVGDDDQSIYGWRGAQVENIQRF 267

Query: 493 ASRFAHSTVHHLDTTYRFNDQIGAVANRFIQQNPHQLPKTL 533
            + F  +    L+  YR    I + AN  I+ N  +L K L
Sbjct: 268 LNDFPGAETIRLEQNYRSTSNILSAANALIENNSGRLGKKL 308



 Score = 47.4 bits (111), Expect = 2e-09
 Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 10/71 (14%)

Query: 595 LDFMTCHASKGKEADYVIILAVDEGQFPARVKALHLDDALNQSEDDFPYAEERRLFYVAL 654
           +  MT H++KG E   V I+ V+EG FP+++            ++     EERRL YV +
Sbjct: 554 VQLMTLHSAKGLEFPQVFIVGVEEGMFPSQMAL----------DEGGRLEEERRLAYVGV 603

Query: 655 TRAKEKVWVTY 665
           TRA +K+ +TY
Sbjct: 604 TRAMQKLTLTY 614



 Score = 25.8 bits (55), Expect = 0.008
 Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 12/107 (11%)

Query: 111 WQQELSRLKRLPSFLSHSSVEAWVAQ--VYADLKLMDMTLHEAQ-KHLPTVF-----DTL 162
           + +E   L  L +FLSH+++EA   Q   + D   + MTLH A+    P VF     + +
Sbjct: 521 YNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQL-MTLHSAKGLEFPQVFIVGVEEGM 579

Query: 163 LP--WLLDTSATL-YERNKAWLEIERANWTVLFSQCESSPLNVSQQY 206
            P    LD    L  ER  A++ + RA   +  +  E+  L   + Y
Sbjct: 580 FPSQMALDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVY 626