Pairwise Alignments

Query, 687 a.a., DNA helicase IV from Vibrio cholerae E7946 ATCC 55056

Subject, 720 a.a., DNA helicase II from Enterobacter sp. TBS_079

 Score = 87.8 bits (216), Expect = 2e-21
 Identities = 90/341 (26%), Positives = 141/341 (41%), Gaps = 49/341 (14%)

Query: 200 LNVSQQYAVLLNDDHNLVLAGAGSGKTSVLTARVSYLLQSHLAKPEQILLVAFARDAAQE 259
           LN  Q+ AV  +  + LVLAGAGSGKT VL  R+++L       P  I+ V F   AA E
Sbjct: 10  LNDKQRDAVAASRTNMLVLAGAGSGKTRVLVHRIAWLQSVENCSPYSIMAVTFTNKAAAE 69

Query: 260 MAERLKNKIGLEAERLHINTFHQLGLRIINRVEGKTVIMSPLANDSKLKQAWCIDWLKRH 319
           M  R+   +G     + + TFH L  R++        + + L  D ++  +     L + 
Sbjct: 70  MRHRIAQLMGTSQGGMWVGTFHGLAHRLLRAHH----MDANLPQDFQILDSEDQLRLLKR 125

Query: 320 WMTPTNF--KRWQKHLAKWPIAYLAGDDELGSHVENPKLIAWLEKQLDQLAQMGLSKKEL 377
            +   N   K+W    A W   Y+ G  + G     P  I      ++Q  Q        
Sbjct: 126 LIKAMNLDEKQWPPRQAMW---YINGQKDEGL---RPHHIQSFGNPVEQTWQ-------- 171

Query: 378 QERLVDHDDYPRLNSELSLCWPCYQAWQQMLKDQNQIDFNIMITRATE-YVEK----GKF 432
                                  Y+A+Q+       +DF  ++ RA E ++ K      +
Sbjct: 172 ---------------------NVYKAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHY 210

Query: 433 RSPWKFIMVDEYQDISPQRLRLLQALCEQNQGQCNLFAVGDDWQSIYQFAGSDVDLTTGF 492
           R  +  I+VDE+QD +  +   ++ L         +  VGDD QSIY + G+ V+    F
Sbjct: 211 RERFTNILVDEFQDTNNIQYAWIRLLAGDTG---KVMIVGDDDQSIYGWRGAQVENIQRF 267

Query: 493 ASRFAHSTVHHLDTTYRFNDQIGAVANRFIQQNPHQLPKTL 533
            + F  +    L+  YR    I + AN  I+ N  +L K L
Sbjct: 268 LNDFPGAQTIRLEQNYRSTSNILSAANALIENNNGRLGKKL 308



 Score = 46.6 bits (109), Expect = 4e-09
 Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 10/71 (14%)

Query: 595 LDFMTCHASKGKEADYVIILAVDEGQFPARVKALHLDDALNQSEDDFPYAEERRLFYVAL 654
           +  MT H++KG E   V I+ ++EG FP+++            ++     EERRL YV +
Sbjct: 554 VQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSL----------DEGGRLEEERRLAYVGV 603

Query: 655 TRAKEKVWVTY 665
           TRA +K+ +TY
Sbjct: 604 TRAMQKLTLTY 614



 Score = 25.4 bits (54), Expect = 0.010
 Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 12/107 (11%)

Query: 111 WQQELSRLKRLPSFLSHSSVEAWVAQ--VYADLKLMDMTLHEAQ-KHLPTVF-----DTL 162
           + +E   L  L +FLSH+++EA   Q   + D   + MTLH A+    P VF     + +
Sbjct: 521 YNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQL-MTLHSAKGLEFPQVFIVGMEEGM 579

Query: 163 LP--WLLDTSATL-YERNKAWLEIERANWTVLFSQCESSPLNVSQQY 206
            P    LD    L  ER  A++ + RA   +  +  E+  L   + Y
Sbjct: 580 FPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVY 626