Pairwise Alignments

Query, 178 a.a., cytochrome B from Vibrio cholerae E7946 ATCC 55056

Subject, 198 a.a., cytochrome b, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 88.6 bits (218), Expect = 6e-23
 Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 17/178 (9%)

Query: 7   WDLFVRVTHWLVAALFLANFFAIEEGSD----LHEWVGYVVMGAIILRLGWGGITHSPAR 62
           WD  +R+ HW +   F   +  + EG D    +H + GY ++  ++ RL WG I    AR
Sbjct: 12  WDPLIRIFHWSLVGFFTLAY--LTEGEDEWMNIHSYAGYSILTLLVFRLLWGVIGTHHAR 69

Query: 63  LTAFTPSIPKAIEHIKEVVRTKQDNHTGHNPAGAIMIWAMWFLLLATGLSGW-------- 114
              F      A  ++K++      ++ GHNPAGA+MI A+   +   G SG         
Sbjct: 70  FNHFITRPSIAWTYLKQLFSGNAKDYIGHNPAGALMIIALITSIAVAGFSGMALYATDSQ 129

Query: 115 ---MSEWDLFWGEDWIKEVHETLANLTMAAVAVHVSAVIIMSKFTGHPYVHGMLIGHK 169
               + +   W E  +KEVHE  AN ++  +A H+  VI+ S       +  M+ G K
Sbjct: 130 GPLATSFFATWPEGALKEVHEFFANFSLFLIATHIGGVIVSSLLHKENLIRAMVTGKK 187