Pairwise Alignments

Query, 984 a.a., TMAO reductase system sensor histidine kinase/response regulator TorS from Vibrio cholerae E7946 ATCC 55056

Subject, 1236 a.a., sensory box histidine kinase/response regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  225 bits (573), Expect = 2e-62
 Identities = 155/425 (36%), Positives = 229/425 (53%), Gaps = 27/425 (6%)

Query: 447  HKLNQEVLNHAKARQQAEQASRAKSAFLATMSHEIRTPMNGVLGTARLLQDTTLTSTQQH 506
            HK N+  L  AK  Q AE A+  KS FLA MSHEIRTPMN ++G  +L   T+LT  Q+ 
Sbjct: 701  HKSNEVALLEAK--QDAELANLYKSEFLANMSHEIRTPMNAIIGMLQLAGRTSLTEQQKD 758

Query: 507  YVQVINRSGRSLLAILNDVLDYSKIEAGHLEIHHTHFDLYRLVSETHELMQSRAREKGIT 566
            Y+   + S +SLL I+ND+LD+SKIEAG LE+    F L +++  + +L   RA+EKGI 
Sbjct: 759  YLDKASFSAQSLLRIINDILDFSKIEAGKLELEKVAFPLDKVLDHSLDLNALRAQEKGIE 818

Query: 567  LTYHIDEDVTQYWQGDEIRIGQVLNNLVGNGIKFTDQGEVRIRIRLAPDGQ---GIRFAV 623
            L  +         +GD +R+GQVL NL+ N +KFT  GE+ +      +      ++F V
Sbjct: 819  LLLYAPVSAGIMLKGDPLRLGQVLINLLSNAVKFTQNGEIELGCEDVGERDHRITLKFWV 878

Query: 624  EDSGIGIAEEEQATLFDAFTQADAG-RRKLGGTGLGLAISRKLVQAMGGELQLASQLGQG 682
             D+GIGI+ E+Q  LFDAF QAD    RK GGTGLGL+IS+ LV  MGG +Q+ S+ G G
Sbjct: 879  RDTGIGISREQQDKLFDAFAQADGSTTRKYGGTGLGLSISKHLVSMMGGTMQVESEPGVG 938

Query: 683  SCFWFTLPLPVGEPVE-TPALAVDDVPVANVLLVEDNEVNCLVAQGFLTSLGHQVTLAKS 741
            S F FT+   + E  +  P +  + +     L+V+DN     +    +     +V  A +
Sbjct: 939  STFSFTVSFEIAEEAKVVPMVVPERLASLRTLVVDDNPTALQIYSSVMRDFHFEVETAST 998

Query: 742  VQEA--KLCFQQQRFDIALLDIHLPDGNGVDLLRDLRQMEDSIHNAVIPFIAVSAHVFNE 799
              EA  KLC  +Q+ D+ LLD  +P+ +G+ ++  + +M      A  P I +       
Sbjct: 999  GAEALYKLC--KQQVDLVLLDWMMPEMDGIQVIDAIDEMVAEGKLAARPVIII------- 1049

Query: 800  EVAGYLAAGFDGYLPKPLVKEQLAAMLRQQLTAKSGDDADMRDKA----ESHDTSSIFDN 855
             +  Y A      L   L  +++ AML++   A S  D  +R  A    ++     + D 
Sbjct: 1050 -MTAYAAEP----LKVDLDSDRVFAMLQKPFKASSLFDEIIRAFAPPAPKALPAPPVEDE 1104

Query: 856  GQPQG 860
            G+ QG
Sbjct: 1105 GEHQG 1109



 Score = 60.1 bits (144), Expect = 9e-13
 Identities = 42/129 (32%), Positives = 68/129 (52%), Gaps = 5/129 (3%)

Query: 696  PVETPALAVDDVPVAN--VLLVEDNEVNCLVAQGFLTSLGHQVTLAKSVQEAKLCFQQQR 753
            P   PA  V+D       VLLVEDN +N  VA   L S G++V +A + Q +     ++ 
Sbjct: 1093 PKALPAPPVEDEGEHQGVVLLVEDNFINQQVATELLKSAGYEVDVADNGQISLEMVGKRS 1152

Query: 754  FDIALLDIHLPDGNGVDLLRDLRQMEDSIHNAVIPFIAVSAHVFNEEVAGYLAAGFDGYL 813
            +D  L+DI +P  +G+    +LR+         +P IA++AH  + +    LAAG + ++
Sbjct: 1153 YDAILMDIQMPVMDGLTAATELRKRYSFDE---LPIIAMTAHAMSGDREKSLAAGMNAHI 1209

Query: 814  PKPLVKEQL 822
             KP+V  +L
Sbjct: 1210 TKPIVLNEL 1218