Pairwise Alignments
Query, 984 a.a., TMAO reductase system sensor histidine kinase/response regulator TorS from Vibrio cholerae E7946 ATCC 55056
Subject, 1763 a.a., sensory box histidine kinase/response regulator (RefSeq) from Shewanella amazonensis SB2B
Score = 247 bits (630), Expect = 6e-69
Identities = 184/546 (33%), Positives = 285/546 (52%), Gaps = 59/546 (10%)
Query: 459 ARQQAEQASRAKSAFLATMSHEIRTPMNGVLGTARLLQDTTLTSTQQHYVQVINRSGRSL 518
A++ A+ A++AKS FLA MSHEIRTPMN ++G ++L T L Q++YV+ I R+ +SL
Sbjct: 1026 AKEDADAANQAKSDFLANMSHEIRTPMNAIIGMSQLCLQTELDRKQRNYVEKIERASKSL 1085
Query: 519 LAILNDVLDYSKIEAGHLEIHHTHFDLYRLVSETHELMQSRAREKGITLTYHIDEDVTQY 578
L I+ND+LD+SKIEAG L+I F L ++ + ++ +A +K + L + + V +
Sbjct: 1086 LGIINDILDFSKIEAGKLDIEVVPFQLDTILEDLGDMFSVKAADKQLELLFSVAPGVPTH 1145
Query: 579 WQGDEIRIGQVLNNLVGNGIKFTDQGEVRIRI-RLAPDGQGI--RFAVEDSGIGIAEEEQ 635
+GD +R+ QVL NL+ N IKFT++GEV + I LA D + +FAV DSGIG+ E+Q
Sbjct: 1146 LEGDPLRLSQVLINLMNNAIKFTERGEVMLSISELARDEDQVQLKFAVRDSGIGLTAEQQ 1205
Query: 636 ATLFDAFTQADAG-RRKLGGTGLGLAISRKLVQAMGGELQLASQLGQGSCFWFTLPLPVG 694
A LF +F+QAD RK GGTGLGLAI ++LV+ MGGE+ + SQ G GS F+FT+ + V
Sbjct: 1206 AKLFKSFSQADTSTTRKYGGTGLGLAICKQLVELMGGEIGVDSQFGNGSTFYFTVSVKVA 1265
Query: 695 EPVETPALAVDDVPVANVLLVEDNEVNCLVAQGFLTSLGHQVTLAKSVQEAKLCFQQQRF 754
+ + ++ VL+V+DN + + L S+G V A+S EA ++ +
Sbjct: 1266 QNAQLN--VEQELEGMAVLVVDDNSTARDILRTTLQSMGFSVDSARSGMEALEKCAERDY 1323
Query: 755 DIALLDIHLPDGNGVDLLRDLRQMEDSIHNAVIPFI-AVSAHVFNEEVAGYLAAGFDGYL 813
IAL+D +P+ +G + +R+++ P I VSAH +E + G +GY+
Sbjct: 1324 RIALIDWKMPEMDGTETAARMRELKQP------PLILMVSAHANSEFIDKVEEMGINGYI 1377
Query: 814 PKPL--------------------VKEQLAAMLRQQLTAKSG------DDADMRDKAESH 847
KP+ V+ + M Q+L+ G +D +M + S
Sbjct: 1378 TKPISASRLLDGIMSALGRQGHKPVRRKAQPMDAQKLSGLKGKRILLVEDNEMNQEVASE 1437
Query: 848 DTS------SIFDNGQ----PQGEPSPEAQAVRKEWVAVMDHAKFEQDVQILGVEKMREI 897
SI DNGQ G+ S + + + + VMD + ++++ L +
Sbjct: 1438 FLEQVGVVLSIADNGQIALEKLGQQSFDLVLMDCQ-MPVMDGYQATRELRKLPGLAELPV 1496
Query: 898 VGYFEQGCAEFFALCEAERDNDAQIKSQAHKLKGSAGALWLTQLYQLCQQ---IEKADSP 954
V A +C ND K G L+ T L LC + +E AD+
Sbjct: 1497 VAMTANAMAGDKEMCLLAGMNDHIAKPI------EVGILYQTLLQYLCPEAKGLESADAD 1550
Query: 955 AAAYQQ 960
AAA Q+
Sbjct: 1551 AAADQE 1556
Score = 63.2 bits (152), Expect = 2e-13
Identities = 47/141 (33%), Positives = 73/141 (51%), Gaps = 5/141 (3%)
Query: 712 VLLVEDNEVNCLVAQGFLTSLGHQVTLAKSVQEAKLCFQQQRFDIALLDIHLPDGNGVDL 771
+LLVEDNE+N VA FL +G +++A + Q A QQ FD+ L+D +P +G
Sbjct: 1422 ILLVEDNEMNQEVASEFLEQVGVVLSIADNGQIALEKLGQQSFDLVLMDCQMPVMDGYQA 1481
Query: 772 LRDLRQMEDSIHNAVIPFIAVSAHVFNEEVAGYLAAGFDGYLPKPLVKEQLAAMLRQQL- 830
R+LR++ A +P +A++A+ + L AG + ++ KP+ L L Q L
Sbjct: 1482 TRELRKLPGL---AELPVVAMTANAMAGDKEMCLLAGMNDHIAKPIEVGILYQTLLQYLC 1538
Query: 831 -TAKSGDDADMRDKAESHDTS 850
AK + AD A+ TS
Sbjct: 1539 PEAKGLESADADAAADQEVTS 1559
Score = 28.5 bits (62), Expect = 0.004
Identities = 52/263 (19%), Positives = 103/263 (39%), Gaps = 44/263 (16%)
Query: 523 NDVLDYSKIEAGHLEIHHTHFDLYRLVSETHELMQSRAREKGITLTYHIDEDVTQYWQGD 582
N+VLD ++ A + + ++ ++++ H + ++A YH + W
Sbjct: 815 NEVLDNFELVAERI-VEEDRGEIIQMLAGRHGMQWTKA------FRYHFPSGELR-WLEA 866
Query: 583 EIRIGQVLNNLVGNGIKFTDQGEVRIRIRLAPDGQGIRFAVEDSGIGIAE-EEQATLFDA 641
R + + LV NG G R+ LA R +++GIGI +++ + D
Sbjct: 867 GARGSKQQDALVWNGYLMDISGRKRMETELAQSEAHFRALFDNAGIGIVNLDDRGIIKDC 926
Query: 642 FTQ--ADAG-------RRKLG----------GTGLGLAISRKLVQAMGGELQLASQLGQG 682
Q +D G R++L TGL A++ ++ GE ++ G G
Sbjct: 927 NGQFVSDLGISSDSLKRKQLADLMHPEDRALATGLYQALAESEQGSISGEWRMLD--GDG 984
Query: 683 SCFWFTLPLPVGEPVETPALAVDDVPVANVLLV-----------EDNEVNCLVAQGFLTS 731
W + V E + +V + +AN+ + ED + FL +
Sbjct: 985 ELMWMAVIASVLEEGDGGERSV-VMSIANITRLKLLSDELMAAKEDADAANQAKSDFLAN 1043
Query: 732 LGHQVTLAKS--VQEAKLCFQQQ 752
+ H++ + + ++LC Q +
Sbjct: 1044 MSHEIRTPMNAIIGMSQLCLQTE 1066