Pairwise Alignments

Query, 984 a.a., TMAO reductase system sensor histidine kinase/response regulator TorS from Vibrio cholerae E7946 ATCC 55056

Subject, 973 a.a., sensor histidine kinase/response regulator TorS (RefSeq) from Shewanella amazonensis SB2B

 Score =  358 bits (919), Expect = e-102
 Identities = 298/982 (30%), Positives = 483/982 (49%), Gaps = 87/982 (8%)

Query: 3   LAKASIGRKLLFSFSAMALLVLLSALIGVLGFSLVAKTERDVVNNAIPSMIEARQVAELS 62
           L+ +S+  +L+ +F  +A L+LL   +G +    V + +  +   ++P+   AR++ + +
Sbjct: 6   LSFSSLSGRLILAFVLLAALLLLLVSLGSVSLQWVKQADHMLYERSLPASDAARELVQSA 65

Query: 63  HQIIASVQTLSNAKNEQEHQAAGQKVFSQLETLLTHIQQLGEEAFDSVL--LDRLEQDVQ 120
             +  + Q L+    E + +  G+K+  +   LL+  ++L     D+ +   + L +D  
Sbjct: 66  AALTENTQLLARVSEENQRELIGRKLSIETANLLSAAEKLRSLGVDTAVDTPNTLGRDSG 125

Query: 121 NVIDTLAQLGRRVEHRLTLESQLSTSVKEMRKLAQELEQLTRTQVLNTSTIAIANVTHIY 180
            ++  LA+LG RV  +L L   L+   K +   +    +L + ++     + +A ++  Y
Sbjct: 126 EIVSALAELGNRVGRKLELHDTLTHQAKTLALASATARELVQAELAVVDAVLLAKLSQAY 185

Query: 181 DLLQKQQQAQVYQALDNLVEVDLDLAERLHELHLLAFKVLNEI--------EETQTVTDL 232
              Q+  Q +  + LD+++E +LD+  +L      A  ++N I        E T +   L
Sbjct: 186 P--QQAGQGRSARLLDDIIETELDIQSQLQR----ALSLINRIALVAELADEGTDSGLPL 239

Query: 233 ERIL---ALDSEFAANLSIMQRRVQAVEDPTRSKQMVSLLRGLEKRRIVFELLKQRYSNE 289
             IL   A D     +L  ++R    V DP R   +    + L     V  L     +  
Sbjct: 240 GDILGEGASDGAVENSLWPLKRVSLLVRDPVRQASLEEETQRLLHVGAVLTLRADFLNAS 299

Query: 290 QAA---QQLLHDTLTQFAKLNNTVNQLVDASNQVTTAAVSKLSNTLYDAQLILTVLGLLG 346
           ++    QQLL D L         ++Q +D + Q  +A   +     Y  QL     GL G
Sbjct: 300 RSVNSLQQLLQDKLFG-------LSQRLDRALQTQSAKALEARKD-YLRQLSWAGAGLWG 351

Query: 347 -----LVIVVWIVWKVVYRSVIQRLDQHTAALLSVAKGQLDVDVSTQGNDELGQMGQAI- 400
                L++++ + ++V+Y+ +  RL + T A+ S+A+G  D+ +   G+DEL  M +AI 
Sbjct: 352 TGLAMLLLILLVSYRVIYKGIAVRLGEATGAMHSLARGNTDISLDPHGDDELTAMAEAIE 411

Query: 401 AHARDTAKALKVVAESEVLAKRELQQHKEHLEELVEQRTCQLSEMNHKLNQEVLNHAKAR 460
           A    T +  ++  E    A REL  HK  LE  V +RT +L              A AR
Sbjct: 412 AFKAKTIRNQELAGELRESA-RELASHKAALEVKVIERTAEL--------------ASAR 456

Query: 461 QQAEQASRAKSAFLATMSHEIRTPMNGVLGTARLL-QDTTLTSTQQHYVQVINRSGRSLL 519
           + AE AS+AKS FLATMSHEIRTP+NG++GT  LL +D +LT +Q   + +   S   L 
Sbjct: 457 EAAENASQAKSRFLATMSHEIRTPLNGLMGTLELLDKDKSLTESQHQLLGLSRYSAVLLQ 516

Query: 520 AILNDVLDYSKIEAGHLEIHHTHFDLYRLVSETHELMQSRAREKGITLTYHIDEDVTQYW 579
            +L+D+LD+S++E G L+      D  +L+ E   +M + A   G+ L   +  +V QY 
Sbjct: 517 TLLSDILDFSRLEKGQLKAQPAPVDFPQLLDEVMNVMLAGASLAGLGLEL-LTTNVPQYV 575

Query: 580 QGDEIRIGQVLNNLVGNGIKFTDQGEVRIRIRLAPDGQGIRFAVEDSGIGIAEEEQATLF 639
             D  ++ QVL NL+GN IKFT +G V +R+  + +GQ + F+V D+G+G+ E  +  LF
Sbjct: 576 SLDGPKLRQVLLNLLGNAIKFTQRGSVVLRV--SAEGQRLHFSVTDTGVGMDEATRQRLF 633

Query: 640 DAFTQADA-GRRKLGGTGLGLAISRKLVQAM---GGE------LQLASQLGQGSCFWFTL 689
             +      GR +  GTGLGLAISR+LV  M   G E      +Q+ S  G GSCF F+L
Sbjct: 634 TPYETGHVQGRAR--GTGLGLAISRELVCLMADVGPESVNEVGIQVESLQGVGSCFSFSL 691

Query: 690 PLP-VGEPVETPALAVDDVPVANVLLVEDNEVNCLVAQGFLTSLGHQVTLAKSVQEAKLC 748
           PL     P E  A +   V    VLLVEDN+VN LVA+G+L +LGH+ + A  + EA+  
Sbjct: 692 PLVHCDAPAEAAAQSFVAVSPRRVLLVEDNQVNALVARGYLATLGHEASWAWDLAEARRL 751

Query: 749 FQQQRFDIALLDIHLPDGNGVDLLRDLRQMEDSIHNAVIPFIAVSAHVFNEEVAGYLAAG 808
              ++FD  +LD+ LPDG+G  LL  L         A I   A +A V  + VAGY  AG
Sbjct: 752 LAAEQFDALMLDMQLPDGDGRSLLPSL--------PAGILVAAFTAQVDIDAVAGYQRAG 803

Query: 809 FDGYLPKPLVKEQLAAMLRQQLTAKSGDDADMRDKAESHDTSSIFDNGQPQGEPSPEAQA 868
            +  L KPL    L   L          DA   D +++  + +      P  + +    A
Sbjct: 804 VETVLAKPLSLAALGHWL---------GDASQTDVSQTDVSRADASLAVPVTDAAVH-NA 853

Query: 869 VRKEWVAVMDHAKFEQDVQILGVEKMREIVGYFEQGCAEFFALCEAERDNDAQIKSQAHK 928
           +R     ++D  + E D+ ILG + + E+   F       FA  E       + +++ H 
Sbjct: 854 LRTANPGLLDIEQLELDLDILGRDTLEEMAQQFASSSEAQFAAFE-RGVATLERQTRLHS 912

Query: 929 LKGSAGALWLTQLYQLCQQIEK 950
           LKG++ ++ L  L QL  ++EK
Sbjct: 913 LKGASASMGLKALAQLAAELEK 934