Pairwise Alignments

Query, 984 a.a., TMAO reductase system sensor histidine kinase/response regulator TorS from Vibrio cholerae E7946 ATCC 55056

Subject, 1287 a.a., signal transduction histidine kinase-like protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  238 bits (607), Expect = 2e-66
 Identities = 187/595 (31%), Positives = 291/595 (48%), Gaps = 55/595 (9%)

Query: 274 KRRIVFELLKQRYSNEQAA--------QQLLHDTLTQFAKLNNTVNQLVDASNQVTTAAV 325
           +R +V +  ++  S E+ A        +QL+H+  +Q  K+      ++DA++    A  
Sbjct: 344 RRAVVLQHRRELASAEEKALLSAKAKLEQLVHERTSQLEKMGVLQRTILDAASYAIIAT- 402

Query: 326 SKLSNTLYDAQLILTVLG-----LLGLVI--VVWIVWKVVYR---SVIQRLDQHTAALLS 375
                   D + I+TV       LLG     +V +    ++     V++R  Q +  L +
Sbjct: 403 --------DTEGIITVFNPSAERLLGFTAKEMVGLQTPAIFHLEEEVVRRATQLSEELGT 454

Query: 376 VAKGQLDVDV--STQGNDELGQMGQAI-AHARDTAKALKVVAESEVLAKRELQQHKEHLE 432
             +   D  V  S +G ++         + AR T K        E    +++  +     
Sbjct: 455 KIEPGFDAFVAKSRRGKEDTNNWTYVSKSGARITVKLSVTTLYGE---DKDIMGYLGIAY 511

Query: 433 ELVEQRTCQLSEMNHKLNQEVLNHAKARQQAEQASRAKSAFLATMSHEIRTPMNGVLGTA 492
           +L EQ          K  QE+   A AR+QA QASRAKS FLA MSHEIRTPMN VLG  
Sbjct: 512 DLTEQL---------KREQEL---ADAREQALQASRAKSDFLANMSHEIRTPMNAVLGLL 559

Query: 493 RLLQDTTLTSTQQHYVQVINRSGRSLLAILNDVLDYSKIEAGHLEIHHTHFDLYRLVSET 552
           ++   T L    + Y++   ++ +SLLA+LND+LD+SKIEAG +E+    F L +L+ + 
Sbjct: 560 QMTLQTELPPRPRDYLEKTQQAAKSLLALLNDILDFSKIEAGRIELERQGFSLQQLLGDM 619

Query: 553 HELMQSRAREKGITLTYHIDEDVTQYWQGDEIRIGQVLNNLVGNGIKFTDQGEV--RIRI 610
             ++ S+ ++K I L Y +   V     GD +R+ Q+L N++ N IKFT++G++  RI  
Sbjct: 620 GSILSSQVQQKDIELVYQVAPSVPDQLIGDSLRLRQILLNVLTNAIKFTEKGDIITRIDA 679

Query: 611 RLAPDGQ-GIRFAVEDSGIGIAEEEQATLFDAFTQADAG-RRKLGGTGLGLAISRKLVQA 668
            L  DG   +   ++DSGIG+  E+QA +F  F+QAD+   R+ GGTGLGLAI+R+LV  
Sbjct: 680 DLGDDGTCHLHIEIQDSGIGMTNEQQAIIFKGFSQADSSISRRYGGTGLGLAITRELVHL 739

Query: 669 MGGELQLASQLGQGSCFWFTLPLPVGEPVETPALAVDDVPVANVLLVEDNEVNCLVAQGF 728
           M GE+++ S  G GS F   + L        P      V    VLLVEDN  + LV    
Sbjct: 740 MQGEIRVTSSPGVGSTFTIDVQLGFDATKYRPGARFSGV---RVLLVEDNHTSRLVFSEL 796

Query: 729 LTSLGHQVTLAKSVQEAKLCFQQ---QRFDIALLDIHLPDGNGVDLLRDLRQMEDSIHNA 785
           L  LG +VT   +   A    ++     FD+ L D  LP  +G++L   +R ++      
Sbjct: 797 LRDLGCEVTALNNGLTAMKTIERMAPDSFDVLLADWQLPGLDGLELASWIRHLDSLSRQP 856

Query: 786 VIPFIAVSAHVFNEEVAGYLAAGFDGYLPKPLVKEQLAAMLRQQLTAKSGDDADM 840
            I  +   +    E    +    FD  L KP+ +E ++  L+  L   + D  DM
Sbjct: 857 GIIIVTAFSQAMLEAQLKHREEEFDATLIKPVTREMVSRCLQSVLERHNNDGLDM 911



 Score = 65.1 bits (157), Expect = 3e-14
 Identities = 73/288 (25%), Positives = 120/288 (41%), Gaps = 24/288 (8%)

Query: 712  VLLVEDNEVNCLVAQGFLTSLGHQVTLAKSVQEAKLCFQQQRFDIALLDIHLPDGNGVDL 771
            +LLVEDN  N LVA   L  LG +V  A    +A     +Q+FD+ L+DI +P   G+D 
Sbjct: 926  LLLVEDNATNRLVATSLLGQLGAEVIEAVDGFQALKLLSRQQFDLVLMDIQMP---GMDG 982

Query: 772  LRDLRQMEDSIHNAVIPFIAVSAHVFNEEVAGYLAAGFDGYLPKPLVKEQLAAMLRQQLT 831
             +  R++ + +    +P IA++A+   E+      AG + ++ KP   +++A  L Q L+
Sbjct: 983  YQTTRKIRNELMLTDLPIIAMTANAMPEDKQACRDAGMNCHISKPFEIDEVATKLLQYLS 1042

Query: 832  AKSGDDADMRDKAESHDTSSIFDNGQPQGEPSPEAQAVRKEWVAVMDHAKFEQDVQILGV 891
                        AE   TS+    G     P      +     A+    +       L +
Sbjct: 1043 PPEHPMRSSEALAEDESTSA----GSLTAAPEAAVTEMHNPKDALPQSVRQFSQANGLDL 1098

Query: 892  EKMREIVG---YFEQGCAEFFA-LCEAER--------DNDAQIKSQAHKLKGSAGALWLT 939
            E+    +G    F +   +F   + +A+R          DA+I  Q H LK  A +   T
Sbjct: 1099 EEACNRLGDRELFTRVIDQFLLDISQAQRCLSVPEIAMKDARI--QYHSLKSGAASCGFT 1156

Query: 940  QLYQLCQQIEKADSPAAAYQQTP---LVDAVENAKQALRNALDLLSKE 984
             L  + +  E    P A  +  P   ++ A+  A   L     LLS +
Sbjct: 1157 ALALVLRNAEANCRPEAELRVAPDEAVLRALPEAISQLEQLQPLLSPQ 1204