Pairwise Alignments

Query, 984 a.a., TMAO reductase system sensor histidine kinase/response regulator TorS from Vibrio cholerae E7946 ATCC 55056

Subject, 1768 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  241 bits (615), Expect = 3e-67
 Identities = 144/379 (37%), Positives = 225/379 (59%), Gaps = 12/379 (3%)

Query: 448  KLNQEVLNHAKARQQAEQASRAKSAFLATMSHEIRTPMNGVLGTARLLQDTTLTSTQQHY 507
            KL  E L  AK    A+ AS+AKS FLA MSHEIRTPMN ++G ++L   T+L   QQ+Y
Sbjct: 1020 KLLSEELTQAK--DVADAASKAKSDFLANMSHEIRTPMNAIIGMSQLCLQTSLDKKQQNY 1077

Query: 508  VQVINRSGRSLLAILNDVLDYSKIEAGHLEIHHTHFDLYRLVSETHELMQSRAREKGITL 567
            V+ I+R+ +SLL I+ND+LD+SKIEAG L+I    F L  ++ +  ++   +A +K + L
Sbjct: 1078 VEKIDRASKSLLGIINDILDFSKIEAGKLDIEAVPFQLDTMLEDLSDMFSVKAADKQLEL 1137

Query: 568  TYHIDEDVTQYWQGDEIRIGQVLNNLVGNGIKFTDQGEVRIRI-RLAPDGQGI--RFAVE 624
             + +  ++ ++  GD +R+ QVL NL+ N IKFT+QGEV + I +L  + + I  +F+V 
Sbjct: 1138 LFAVAPNIPRHLVGDPLRLSQVLINLMNNAIKFTEQGEVMLSISQLVREDEEILLKFSVR 1197

Query: 625  DSGIGIAEEEQATLFDAFTQADAG-RRKLGGTGLGLAISRKLVQAMGGELQLASQLGQGS 683
            D+GIG+ EE++  LF +F+QAD+   RK GGTGLGLAI ++LV+ MGGE+ + SQ G GS
Sbjct: 1198 DNGIGLTEEQRGKLFQSFSQADSSTTRKYGGTGLGLAICKQLVELMGGEIGVESQFGNGS 1257

Query: 684  CFWFTLPLPVGEPVETPALAVDDVPVANVLLVEDNEVNCLVAQGFLTSLGHQVTLAKSVQ 743
             F+F++   V +          ++    +L+ +DN     + +  L S+G  V   +S  
Sbjct: 1258 TFFFSVRFKVAD--NQLIKVAQELEGMRILVADDNATARDILRSTLESMGFTVDTVRSGA 1315

Query: 744  EAKLCFQQQRFDIALLDIHLPDGNGVDLLRDLRQMEDSIHNAVIPFIAVSAHVFNEEVAG 803
            EA    Q+  + +AL+D  +P+ +G++  R L     +    +I    VSAH   + +  
Sbjct: 1316 EALSRCQETDYGVALIDWRMPEMDGLETARRLLSERTNPPKTLI----VSAHADGDFIDK 1371

Query: 804  YLAAGFDGYLPKPLVKEQL 822
               A   GY+ KP+   +L
Sbjct: 1372 AEQAEISGYITKPISASRL 1390



 Score = 79.3 bits (194), Expect = 2e-18
 Identities = 74/266 (27%), Positives = 121/266 (45%), Gaps = 32/266 (12%)

Query: 712  VLLVEDNEVNCLVAQGFLTSLGHQVTLAKSVQEAKLCFQQQRFDIALLDIHLPDGNGVDL 771
            +LLVEDNE+N  VA  FL  +G  +++A++ Q A      Q FD+ L+D  +P  +G   
Sbjct: 1426 ILLVEDNEMNQEVASEFLEQVGVILSIAENGQVALEKLAMQSFDLVLMDCQMPVMDGYQA 1485

Query: 772  LRDLRQMEDSIHNAVIPFIAVSAHVFNEEVAGYLAAGFDGYLPKPLVKEQLAAMLRQQLT 831
              +LR+  +    A +P IA++A+    +    L AG + ++ KP+      ++L + L 
Sbjct: 1486 TAELRKRPEL---ADLPVIAMTANAMAGDKEMCLRAGMNDHIAKPIE----VSLLYKTLL 1538

Query: 832  AKSGDDADMRDKAESHDTSSIFDNGQPQGEPSPEAQAVRKEWVAVMDHAKFEQDVQILGV 891
               GDD+ + ++  +  T     + Q    P   A  + K    V + A+          
Sbjct: 1539 EYLGDDSQVIEETSTEQTD---QHSQDAYWPQHPALDIDKGLQLVQNSARL--------- 1586

Query: 892  EKMREIVGYFEQG---CAEFFALCEAERDNDAQIKSQAHKLKGSAGALWLTQLYQLCQQI 948
               R I   F  G   CAE  A  + E   +  ++  AH LKG AG L   +L  L +Q+
Sbjct: 1587 --YRRIFERFYTGQSRCAELIATAQREGKQEEAVR-YAHTLKGVAGNLCCPELVALAKQV 1643

Query: 949  E-------KADSPAAAYQQTPLVDAV 967
            E       +AD   A  Q   L+D++
Sbjct: 1644 EQTLSDSIEADVTEALTQMGELLDSL 1669