Pairwise Alignments

Query, 984 a.a., TMAO reductase system sensor histidine kinase/response regulator TorS from Vibrio cholerae E7946 ATCC 55056

Subject, 1041 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  389 bits (998), Expect = e-112
 Identities = 317/1030 (30%), Positives = 513/1030 (49%), Gaps = 101/1030 (9%)

Query: 5    KASIGRKLLFSFSAMALLVLLSALIGVLGFSLVAKTERDVVNNAIPSMIEARQVAELSHQ 64
            K+ +GR L+ +FS +ALL+L    +G +    V   ++ +   A+P+   ARQ+ +    
Sbjct: 9    KSLVGR-LMLAFSLLALLLLTLVSLGSVSLYWVKAADKYLYEEALPASEAARQLMQSVSA 67

Query: 65   IIASVQTLSNAKNEQEHQAAGQKVFSQLETLLTHIQQLGEEAFDSVLLDRLEQDVQNVID 124
            +  + Q L   + E E    G+K+  +   LL  I +L  ++ +      L      +I 
Sbjct: 68   LQENAQALERTQEEAERAFLGRKLSIESSNLLGAIARL--KSLNLQGDSHLGPRAAEIIH 125

Query: 125  TLAQLGRRVEHRLTLESQLSTSVKEMRKLAQELEQLTRTQVLNTSTIAIANVTHIYDLLQ 184
             L QLG +V  RL L  QL    + +   +    +L   ++    +  +A ++  Y  + 
Sbjct: 126  DLTQLGHQVGERLALAKQLKGDGQALVDASGRAIELLEAELAVVDSAVLAKLSLAYPEVA 185

Query: 185  KQQQAQVYQALDNLVEVDLDLAERLHE----LHLLAF--KVLNEIEE----TQTVTDLER 234
               Q+     LD ++E DLD+  RL+     +H LA   ++L   E+    ++ +  + R
Sbjct: 186  GTTQSG--YLLDTIIEKDLDIQARLNRALALIHHLALVGQLLQSPEQHLGLSKVLVSMSR 243

Query: 235  IL------------------------------ALDSEFAANLSIMQRRVQAVEDPTRSKQ 264
            +L                               L      NL  ++     V DP R+ +
Sbjct: 244  VLTEQGGGEYRLQPSEAQGGMPGNEPASAASYVLAGINQPNLMPLELLKGVVRDPVRATE 303

Query: 265  M---VSLLRGLEKRRIVFELLKQRYSNEQAAQQLLHDTLT-QFAKLNNTVNQLVDASNQV 320
            +   +++LRG+  +      L++RY+   A Q     TL+ + ++LN  V+  + A    
Sbjct: 304  LAHELAILRGVGDKL----ALQRRYAGVLALQTAQLQTLSDKLSQLNTQVDGAMTAQQTQ 359

Query: 321  TTAAVSKLSNTLYDAQLILTVLGLLGLVIVVWIVWKVVYRSVIQRLDQHTAALLSVAKGQ 380
               A       L+ A+  L   GLL LV+++ +V++V+Y+ +  RL + T AL  ++ G 
Sbjct: 360  AEQARGDFLRQLFWAKAGLWGTGLLMLVLILLVVYRVIYKGIALRLHEATDALARLSNGD 419

Query: 381  LDVDVSTQGNDELGQMGQAI-AHARDTAKALKVVAESEVLAKRELQQHKEHLEELVEQRT 439
              V +   G+DEL  M  AI A  + T    ++ +E +  A  EL  HK  LE  V++RT
Sbjct: 420  TQVALDPHGDDELTAMASAIDAFKQKTDHNQRLQSELQETAS-ELSAHKASLETTVQERT 478

Query: 440  CQLSEMNHKLNQEVLNHAKARQQAEQASRAKSAFLATMSHEIRTPMNGVLGTARLLQDTT 499
             +L++ N +L+ EV  HA+ARQ AE A +AKS FLATMSHEIRTP+NG+LGT  LL ++ 
Sbjct: 479  QELAQANRRLDAEVQGHAQARQMAEAADKAKSLFLATMSHEIRTPLNGLLGTLTLLGESE 538

Query: 500  LTSTQQHYVQVINRSGRSLLAILNDVLDYSKIEAGHLEIHHTHFDLYRLVSETHELMQSR 559
            L + Q+  + +   SG  L  +LND+LD+S++E G L        +  L+ E   +M + 
Sbjct: 539  LPTAQKQMLALSQYSGALLQTVLNDILDFSRLEQGKLSNEPRPVAINELLDEVVSIMLAG 598

Query: 560  AREKGITLTYHIDEDVTQYWQGDEIRIGQVLNNLVGNGIKFTDQGEVRIRIRLAPDGQGI 619
            A   G++L     E + ++   D  ++ QVL NL+GN IKFT  GE+ +R+  A  G  +
Sbjct: 599  AGNAGLSLRLE-RERLPEWINIDGPKLRQVLFNLLGNAIKFTPAGEICLRVSQA--GARL 655

Query: 620  RFAVEDSGIGIAEEEQATLFDAFT-QADAGRRKLGGTGLGLAISRKLVQAMGG---ELQL 675
            +F V D+G+GI E+ +A LF A++ Q + GR +  GTGLGLAIS++LV  MG     L +
Sbjct: 656  KFTVSDTGLGIPEDAKARLFIAYSAQPNQGRSR--GTGLGLAISKELVTLMGAGDEGLWV 713

Query: 676  ASQLGQGSCFWFTLPLPVGEPVETPALAVDD----VPVANVLLVEDNEVNCLVAQGFLTS 731
             +++ +GS F F+LPL   E  E P L+  D    V    VL+VEDN+VN +VAQGFL  
Sbjct: 714  ETEVNKGSTFGFSLPL---EACEAPVLSATDIIPQVAPKRVLVVEDNQVNVMVAQGFLAH 770

Query: 732  LGHQVTLAKSVQEAKLCFQQQ--RFDIALLDIHLPDGNGVDLLRDLRQMEDSIHNAVIPF 789
            LGH+V LA S  EA   F+ +   FD  +LDI L DG+G+DLL  LR+   S     + F
Sbjct: 771  LGHEVVLAPSCAEAMAVFEDKDAGFDAVMLDIQLSDGSGIDLLSQLRECAAS----DVLF 826

Query: 790  IAVSAHVFNEEVAGYLAAGFDGYLPKPLVKEQLAAMLRQQL-----TAKSGDDADMRDKA 844
             A +A +  +++  Y A GFD  L KPL  + L   L +        A+  +D   ++ A
Sbjct: 827  AAFTAQLQPQDLEVYRAVGFDEILAKPLNMQALMRWLGRASKTSAPVAEEAEDVKEKEAA 886

Query: 845  ESHDTSSIFDNGQPQGEPSPEAQAVRKEWV--AVMDHAKFEQDVQILGVEKMREIVG-YF 901
            E  ++         +    P+   +    +   ++D A+F+ D   LG   M +++  Y 
Sbjct: 887  ERVESDETSAEVLAEENSLPDDPLLNDPLLDAPLLDSAQFQGDFDCLGEAAMVQMLSLYL 946

Query: 902  EQGCAEFFAL-----------CEAERDNDAQIKSQA-----HKLKGSAGALWLTQLYQLC 945
                A+   L            E E +  A+ K++A     H LKGS+  + + +L + C
Sbjct: 947  SSSEAQLTELEQLVESTPEQKAEQEAEQAAEDKNEACRKLLHGLKGSSANMGMVRLTRRC 1006

Query: 946  QQIEKADSPA 955
            QQ+EK++  A
Sbjct: 1007 QQLEKSELQA 1016