Pairwise Alignments

Query, 984 a.a., TMAO reductase system sensor histidine kinase/response regulator TorS from Vibrio cholerae E7946 ATCC 55056

Subject, 933 a.a., hybrid sensory histidine kinase BarA (RefSeq) from Shewanella loihica PV-4

 Score =  248 bits (634), Expect = 1e-69
 Identities = 160/491 (32%), Positives = 265/491 (53%), Gaps = 50/491 (10%)

Query: 280 ELLKQRYSNEQAAQQLLHDTLTQFAKLNNTVNQLVDASNQVTTAAVSKLSNTLYDAQLIL 339
           EL+   Y +   AQQ+    L   A L N  N L++       A +              
Sbjct: 147 ELVVSPYDSNSMAQQVNSAKLGYIAVLLNKENALLEQHRAAVAAFI-------------- 192

Query: 340 TVLGLLGLVIVVWIVWKVVYRSVIQRLDQHTAALLSVAKGQLDVDVSTQGNDELGQMGQA 399
             + L+G+ + +   +++V ++V   + +    +  + +G+LD  V           G  
Sbjct: 193 --IVLIGVQLNLLFTFRLV-KNVTHPITEMVRVVAKIREGKLDTRVD----------GNL 239

Query: 400 IAHARDTAKALKVVAESEVLAKRELQQHKEHLEELVEQRTCQLSEMNHKLNQEVLNHAKA 459
           I       + +  +A S       L ++ E +++ ++Q T  L E   ++  + +    A
Sbjct: 240 IGELDLLKRGINAMAGS-------LSEYHEEMQQNIDQATSDLRETLEQIEIQNVELDLA 292

Query: 460 RQQAEQASRAKSAFLATMSHEIRTPMNGVLGTARLLQDTTLTSTQQHYVQVINRSGRSLL 519
           +++A +ASR KS FLA MSHE+RTP+NGV+G A+ L  T L ++QQ Y++ I +S  +LL
Sbjct: 293 KKRALEASRIKSEFLANMSHELRTPLNGVIGFAKQLLKTPLHASQQDYIKTIEKSATNLL 352

Query: 520 AILNDVLDYSKIEAGHLEIHHTHFDLYRLVSETHELMQSRAREKGITLTYHIDEDVTQYW 579
            I+ND+LD+SK+EAG +E+ +  F L  ++ +T  L+ + A+EK + L   I+  +    
Sbjct: 353 GIINDILDFSKLEAGKMELENMPFALREVIDDTISLLANSAKEKDLELVVDIEPSINDNV 412

Query: 580 QGDEIRIGQVLNNLVGNGIKFTDQGEVRIRIRLAPDGQ---GIRFAVEDSGIGIAEEEQA 636
            GD +R+ QV+ NLVGN IKFTD G V +++RL  +      +R  + D+GIGI +  QA
Sbjct: 413 SGDALRVSQVITNLVGNAIKFTDSGSVHLKMRLTSEEAEKVNVRCEITDTGIGIDKPHQA 472

Query: 637 TLFDAFTQADAG-RRKLGGTGLGLAISRKLVQAMGGELQLASQLGQGSCFWFTLPL---- 691
            LF AF QAD+   R+ GGTGLGL I+++L+  MGG++   S  G+GS FWFTLPL    
Sbjct: 473 QLFQAFGQADSSISRRFGGTGLGLIITKRLINRMGGQIGCISAPGKGSTFWFTLPLKLSP 532

Query: 692 -PVGEPVETPALAVDDVPVANVLLVEDNEVNCLVAQGFLTSLGHQ-VTLAKSVQEAKLCF 749
            P+ +P+ET     D++    VLL E  E++  V +  L+  G Q +++  +   A++  
Sbjct: 533 YPISQPLET-----DNLIDKTVLLFEPRELSRKVHESLLSHWGMQNISITTAEDLARVAG 587

Query: 750 QQQR-FDIALL 759
           ++ R FD A++
Sbjct: 588 EEGRHFDYAII 598



 Score = 66.6 bits (161), Expect = 7e-15
 Identities = 70/273 (25%), Positives = 118/273 (43%), Gaps = 45/273 (16%)

Query: 711 NVLLVEDNEVNCLVAQGFLTSLGHQVTLAKSVQEAKLCFQQQRFDIALLDIHLPDGNGVD 770
           +VL V+DN  N  + +  L  L  QVT+  + QEA    + + FD+  +DI +P  +G  
Sbjct: 687 SVLAVDDNPANLKLIKTLLKELVTQVTVTDNGQEAVEIAKAKSFDLIFMDIQMPGTDGFS 746

Query: 771 LLRDLRQMEDSIHNAVIPFIAVSAHVFNEEVAGYLAAGFDGYLPKPLVKEQLAAMLRQQL 830
             + +R  E S+ N   P +AV+AH   EE      +G DGYLPKP+ +  L +++ +  
Sbjct: 747 ATKQIR--EHSL-NRNTPIVAVTAHAIAEERERIDQSGMDGYLPKPIDEAALKSVISRWK 803

Query: 831 TAKSGDDADMRDKAESHDTSSIFDNGQPQGEPSPEAQAVRKEWVAVMDHAKFEQDVQILG 890
           T         R +    D  ++                    W   +  A  +     L 
Sbjct: 804 T---------RPQFTHFDQHTL-------------------NWDLCLTQANQKTS---LA 832

Query: 891 VEKMREIVGYFEQGCAEFFALCEAERDNDAQIKSQAHKLKGSAGALWLTQLYQLCQQIEK 950
           +E ++ +V    +   E  +     +D+ A + S  HKL G++    +    +LC++IE+
Sbjct: 833 LEMLQMLVDSLPE-TREHISGALERQDSQAMV-SHVHKLHGASCYCGVPTTQRLCREIEQ 890

Query: 951 ADSPAAAYQQTPLVDAVENAKQALRNALDLLSK 983
                 + +Q   VD VE     +   LD LSK
Sbjct: 891 ------SLKQNASVDLVE---PEILELLDELSK 914