Pairwise Alignments

Query, 984 a.a., TMAO reductase system sensor histidine kinase/response regulator TorS from Vibrio cholerae E7946 ATCC 55056

Subject, 858 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  264 bits (674), Expect = 2e-74
 Identities = 165/417 (39%), Positives = 228/417 (54%), Gaps = 24/417 (5%)

Query: 433 ELVEQRTCQLSEMNHKLNQEVLNHAKARQQAEQASRAKSAFLATMSHEIRTPMNGVLGTA 492
           E V +R    SE+ H           AR++AE A+RAKS FLA MSHEIRTP  G+LG  
Sbjct: 328 EDVTERKAAESELRH-----------AREKAEAANRAKSEFLANMSHEIRTPFTGILGVL 376

Query: 493 RLLQDTTLTSTQQHYVQVINRSGRSLLAILNDVLDYSKIEAGHLEIHHTHFDLYRLVSET 552
            LL  T L   Q+ Y+++   S + LLAILND+LD SKIEAG L IH    DL  L+ E 
Sbjct: 377 DLLLHTPLNEKQERYIRLAYGSTKQLLAILNDILDISKIEAGKLVIHPEEVDLVLLLGEL 436

Query: 553 HELMQSRAREKGITLTYHIDEDVTQYWQGDEIRIGQVLNNLVGNGIKFTDQGEVRIRI-- 610
            E+  + A +KG+   YHI   +     GD +R+ Q++ NL+ N IKFT+ G V + I  
Sbjct: 437 TEVQAAAAAQKGLEFRYHIKGIIPPKIHGDPVRLRQIMANLLNNAIKFTNSGWVELDIEC 496

Query: 611 -RLAPDGQGIRFAVEDSGIGIAEEEQATLFDAFTQADAGRRKL-GGTGLGLAISRKLVQA 668
            R+AP  Q +R  V DSGIG+  E Q T+FD FTQAD+   +L GGTGLGL I ++LV+ 
Sbjct: 497 TRIAPGRQHLRVEVRDSGIGVPPELQETIFDKFTQADSSTTRLFGGTGLGLTICKQLVEL 556

Query: 669 MGGELQLASQLGQGSCFWFTLPLPVGEPVETPALAVD-DVPV------ANVLLVEDNEVN 721
           M G + ++S  G+GSCFWF + LP  +P  +P   +    P+        +LLV+D E N
Sbjct: 557 MHGSIGVSSNSGEGSCFWFDIELPESDPTVSPVPVLPAGSPITALPRDTRILLVDDTEAN 616

Query: 722 CLVAQGFLTSLGHQVTLAKSVQEAKLCFQQQRFDIALLDIHLPDGNGVDLLRDLRQMEDS 781
             V   +L     QV  A +  EA    +  + D  L+D  +   +G +  R +R  E  
Sbjct: 617 REVLAEYLAQAHCQVRQAANGLEAVTLAESWQPDAILMDCQMAGMDGYEATRQIRIQEGQ 676

Query: 782 IHNAVIPFIAVSAHVFNEEVAGYLAAGFDGYLPKPLVKEQLAAMLRQQLTAKSGDDA 838
                 P IA++A V   +    LAAG D YLPKP+  + L A + + L  +  + A
Sbjct: 677 RRRT--PIIALTAFVMRGDREKCLAAGMDDYLPKPVDAQTLIATIGKWLEGRETNPA 731



 Score = 51.2 bits (121), Expect = 3e-10
 Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 9/135 (6%)

Query: 696 PVETPALAVDDVPVANVLLVEDNEVNCLVAQGFLTSLGHQVTLAKSVQEAKLCFQQQRFD 755
           P  TP  +        +LLV+DN      +   L +LG QV  A S +EA     +  FD
Sbjct: 730 PARTPRFS------GRILLVDDNPEIREASTCLLEALGCQVQSASSGEEALQLGPEADFD 783

Query: 756 IALLDIHLPDGNGVDLLRDLRQMEDSIHNAVIPFIAVSAHVFNEEVAGYLAAGFDGYLPK 815
           + L+D  +P  +G    R  R  E     A+   IA++A   +E  A    AG + +L K
Sbjct: 784 LVLMDCRMPGLDGCATTRAWRARERGTPTAI---IALTAGDPDESRAQCREAGMNDFLAK 840

Query: 816 PLVKEQLAAMLRQQL 830
           P  +++L  +LR+ L
Sbjct: 841 PFSEQELVTLLRRWL 855