Pairwise Alignments

Query, 984 a.a., TMAO reductase system sensor histidine kinase/response regulator TorS from Vibrio cholerae E7946 ATCC 55056

Subject, 1026 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  237 bits (604), Expect = 3e-66
 Identities = 149/378 (39%), Positives = 214/378 (56%), Gaps = 11/378 (2%)

Query: 458 KARQQAEQASRAKSAFLATMSHEIRTPMNGVLGTARLLQDTTLTSTQQHYVQVINRSGRS 517
           +A++ AE A+RAKS FLA MSHEIRTPMNGV+G   L  DT LT  Q+ Y++ +  S  +
Sbjct: 401 RAKEAAENANRAKSDFLANMSHEIRTPMNGVIGMTELALDTELTEEQRDYLEAVQMSANA 460

Query: 518 LLAILNDVLDYSKIEAGHLEIHHTHFDLYRLVSETHELMQSRAREKGITLTYHIDEDVTQ 577
           LL+I++D+LD+SKIEAG L++    FDL ++ ++    +  RA +KG+ L       V +
Sbjct: 461 LLSIIDDILDFSKIEAGRLDVELIPFDLEKVCADALRTVAVRADQKGLELLARRGPGVPR 520

Query: 578 YWQGDEIRIGQVLNNLVGNGIKFTDQGEVRIRIRLAPD---GQGIRFAVEDSGIGIAEEE 634
              GD  R+ Q+L NL+GN IKFT++GE+ + + LA     GQ + F V D+GIGIA E+
Sbjct: 521 RLLGDPGRLRQILLNLLGNAIKFTERGEIEVAVELAEPGAAGQVLYFCVSDTGIGIAPEK 580

Query: 635 QATLFDAFTQADAG-RRKLGGTGLGLAISRKLVQAMGGELQLASQLGQGSCFWFTLPLPV 693
           Q  +F+AF Q D+   R+ GGTGLGL I  +L + MGG + + S  GQGS F FTL LP 
Sbjct: 581 QEHIFEAFAQEDSSTTRRFGGTGLGLTICSRLCELMGGRIWVDSVPGQGSAFHFTLQLPT 640

Query: 694 -GEPVETPALAVDDVPVANVLLVEDNEVNCLVAQGFLTSLGHQVTLAKSVQEAKLCFQQQ 752
            G     P   +   P A +L+V +    C + QG L S G  V  A S  E     +Q 
Sbjct: 641 DGAAAPEPERRLSGKP-ALLLVVANARQRCRL-QGLLASWGATVVAAASGAEGLALLEQG 698

Query: 753 RFDIALLDIHLPDGNGVDLLRDLRQMEDSIHNAVIPFIAVSAHVFNEEVAGYLAAGFDGY 812
           ++D  + D    DG+  DLL  L +    +   ++    +S     +E+A   A G   Y
Sbjct: 699 QWDGVVADSRPVDGDAGDLLEHLARSPGRVPLLML----LSPSRMRQEIARCKALGVGHY 754

Query: 813 LPKPLVKEQLAAMLRQQL 830
           L KP + ++L   L+  L
Sbjct: 755 LGKPALADELWRSLQALL 772



 Score = 74.7 bits (182), Expect = 3e-17
 Identities = 48/138 (34%), Positives = 72/138 (52%), Gaps = 6/138 (4%)

Query: 689 LPLPVGEPVETPALAVDDVPVANVLLVEDNEVNCLVAQGFLTSLGHQVTLAKSVQEAKLC 748
           +P  V E   TP   ++      VLL ED+ VN  + +  L  +GH+VTLA+   EA   
Sbjct: 779 VPATVAEAAGTPPAGLE------VLLAEDHPVNQQLMRNMLERMGHRVTLARHGGEAVAA 832

Query: 749 FQQQRFDIALLDIHLPDGNGVDLLRDLRQMEDSIHNAVIPFIAVSAHVFNEEVAGYLAAG 808
             ++RFD+ L+D+ +P+  G    R +R  E +   A +   A+SA    E+    L AG
Sbjct: 833 AARRRFDLVLMDMQMPEMGGEQATRLIRADEQARGLAPLRIYALSAAARREDRQRGLVAG 892

Query: 809 FDGYLPKPLVKEQLAAML 826
            DGYL KPL ++ L  +L
Sbjct: 893 MDGYLLKPLQQKDLQEVL 910