Pairwise Alignments

Query, 984 a.a., TMAO reductase system sensor histidine kinase/response regulator TorS from Vibrio cholerae E7946 ATCC 55056

Subject, 940 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  238 bits (608), Expect = 1e-66
 Identities = 151/425 (35%), Positives = 230/425 (54%), Gaps = 32/425 (7%)

Query: 420 AKRELQQHKEHLEELVEQRTCQLSEMNHKLNQEVLNHAKARQQAEQASRAKSAFLATMSH 479
           A+ ELQ+H++ LEELV++RT QL E+              +  AE A+ AKSAFLA MSH
Sbjct: 530 AEAELQRHRQRLEELVQERTRQLEEL--------------KDAAESANVAKSAFLANMSH 575

Query: 480 EIRTPMNGVLGTARLLQDTTLTSTQQHYVQVINRSGRSLLAILNDVLDYSKIEAGHLEIH 539
           EIRTP+N + G   L++   L   Q  ++  +  + + LL ++N +LD SKIEAG   + 
Sbjct: 576 EIRTPLNAMTGLTHLIRRAGLKPQQAEHMDKLEAAAQHLLGVINAILDLSKIEAGKFALE 635

Query: 540 HTHFDLYRLVSETHELMQSRAREKGITLTYHIDEDVTQYWQGDEIRIGQVLNNLVGNGIK 599
                +  L+      +Q R + KG+ L     + +  +  GD  R+ Q L N  GN +K
Sbjct: 636 EAPVRVESLLGNVASFLQERVQAKGLVLRTEA-QPLPPHLLGDPTRLQQALLNYAGNALK 694

Query: 600 FTDQGEVRIRIRLAPDGQG---IRFAVEDSGIGIAEEEQATLFDAFTQAD-AGRRKLGGT 655
           FT+QG + +R+    +G+    +RF V+D+GIGI  E    LF AF QAD +  R+ GGT
Sbjct: 695 FTEQGSITLRVHTLEEGEADALLRFEVQDTGIGIPPEAMHKLFSAFEQADNSTTRRYGGT 754

Query: 656 GLGLAISRKLVQAMGGELQLASQLGQGSCFWFTLPLPVGE-------PV---ETPALAVD 705
           GLGLAI+RKL Q MGGE   +S+ G+GS FWFT  L  G+       P+           
Sbjct: 755 GLGLAITRKLAQLMGGEAGASSEPGRGSTFWFTARLKKGKERYGNGAPLAGGNAEQRLRQ 814

Query: 706 DVPVANVLLVEDNEVNCLVAQGFLTSLGHQVTLAKSVQEAKLCFQQQRFDIALLDIHLPD 765
           +     VLL ED  +N  + +  L  +G +V LA   + A    +   + + L+D+ +P 
Sbjct: 815 EFAGRTVLLAEDEPINQEITKFMLEDVGLRVELAPDGKVAVERARGNDYALILMDMQMPL 874

Query: 766 GNGVDLLRDLRQMEDSIHNAVIPFIAVSAHVFNEEVAGYLAAGFDGYLPKPLVKEQLAAM 825
            +G+D  R++RQ++    +   P +A++A+ F E+ A  L AG + ++ KP+  + L A 
Sbjct: 875 MDGLDATREIRQLQ---RHRQTPILAMTANAFAEDKARCLGAGMNDFIAKPVNPDVLYAT 931

Query: 826 LRQQL 830
           L Q L
Sbjct: 932 LLQWL 936



 Score = 26.6 bits (57), Expect = 0.008
 Identities = 16/66 (24%), Positives = 32/66 (48%)

Query: 333 YDAQLILTVLGLLGLVIVVWIVWKVVYRSVIQRLDQHTAALLSVAKGQLDVDVSTQGNDE 392
           Y A L   ++ L G ++++  +   + R+ + RL +   ++  +A G  D      G DE
Sbjct: 203 YGAWLHNFLIRLGGYLVLLLTLGSYLNRAFVGRLARLQRSVGDMAAGNYDTRSDDAGGDE 262

Query: 393 LGQMGQ 398
           +G + Q
Sbjct: 263 IGALAQ 268