Pairwise Alignments

Query, 984 a.a., TMAO reductase system sensor histidine kinase/response regulator TorS from Vibrio cholerae E7946 ATCC 55056

Subject, 1025 a.a., sensor histidine kinase/response regulator TorS (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  398 bits (1023), Expect = e-115
 Identities = 316/1006 (31%), Positives = 512/1006 (50%), Gaps = 77/1006 (7%)

Query: 1   MRLAKASIGRKLLFSFSAMALLVLLSALIGVLGFSLVAKTERDVVNNAIPSMIEARQVAE 60
           + L++ S+  +L+ +FS + LL+LL   +G L    + + +R +   ++P+   ARQ+ +
Sbjct: 4   LSLSRRSLTGRLMLAFSVLGLLLLLLVSLGSLSLHWLKQADRYLYEESLPASQAARQLVQ 63

Query: 61  LSHQIIASVQTLSNAKNEQEHQAAGQKVFSQLETLLTHIQQLGEEAFDSVLLDRLEQDVQ 120
            S+ +   V  L   ++E++ +  G+K+  +  T+L  I+ L   A D    + L     
Sbjct: 64  ASNALSDGVTQLGQVEDERQREFIGRKLNLESATMLNSIKVL--LALDVNEDNHLPVLAG 121

Query: 121 NVIDTLAQLGRRVEHRLTLESQLSTSVKEMRKLAQELEQLTRTQVLNTSTIAIANVTHIY 180
            +I+ L  LG+ V  R+TL  +L    +E+   A    +L ++++    +  +A ++  Y
Sbjct: 122 QIIEQLTLLGQSVGQRITLGDELQRRARELSVAAAHASELLQSELAVVDSAILAKLSQAY 181

Query: 181 -DLLQKQQQAQVYQALDNLVEVDLDLAERLHELHLLAFKV-----LNEIEETQTVTDLER 234
            D+   ++  Q+   LD+++E +LD+ E+L+    L  ++     L E+ E Q+   L  
Sbjct: 182 PDMAGNKRSGQL---LDDVIERELDIQEQLNRALKLVHQIALLSQLFEVSELQSELQLS- 237

Query: 235 ILALDSEFAANLS------IMQRRVQAVE-----------------------------DP 259
           +  L + FA+ L       I Q++  A+E                             DP
Sbjct: 238 VPRLLATFASTLPSHPVAHINQQKGTAIEQASEAVTELSAPEVGIDLMALTTVSELIRDP 297

Query: 260 TRSKQMVSLLRGLEKRRIVFEL---LKQRYSNEQAAQQLLHDTLTQFAKLNNTVNQLVDA 316
            R   + + L  L+    + +L   L Q    +Q  QQ L + L     LN  V+  ++ 
Sbjct: 298 GRLNALKAELVTLKHTPKIIKLQRDLSQSLQRQQRQQQALAEKLYS---LNTLVDSALNQ 354

Query: 317 SNQVTTAAVSKLSNTLYDAQLILTVLGLLGLVIVVWIVWKVVYRSVIQRLDQHTAALLSV 376
             Q    A S     L  A+  L   G+L  VI+ W++++V+YR +  RL+Q T A+  +
Sbjct: 355 QQQRAELARSDYLMQLSYARFGLLATGMLMFVIMGWVIYRVIYRGIALRLNQATQAMSRL 414

Query: 377 AKGQLDVDVSTQGNDELGQMGQAI-AHARDTAKALKVVAESEVLAKRELQQHKEHLEELV 435
           + G ++V +  +G+DEL  M  AI A  R TA  LK+ A+   +A  EL +HK+ LE+ V
Sbjct: 415 SLGDINVSLDARGDDELTAMANAIEAFKRKTAHNLKLQADLRQVAD-ELTEHKKALEQTV 473

Query: 436 EQRTCQLSEMNHKLNQEVLNHAKARQQAEQASRAKSAFLATMSHEIRTPMNGVLGTARLL 495
             RT +L+E N +L+ E   HAKAR  AE+AS+AKS FLATMSHEIRTP+NG+LGT  LL
Sbjct: 474 ATRTQELAETNLRLDAEAKGHAKARVVAEEASQAKSQFLATMSHEIRTPLNGLLGTLTLL 533

Query: 496 QDTTLTSTQQHYVQVINRSGRSLLAILNDVLDYSKIEAGHLEIHHTHFDLYRLVSETHEL 555
             + L   QQ  + +   SG  L  +L+D+LD+S++E G+L       D+  L+ E   +
Sbjct: 534 GQSQLPPAQQQMLALSQYSGTLLQTVLSDILDFSRLEQGNLTNEPRPTDINALLDEVLAI 593

Query: 556 MQSRAREKGITLTYHIDEDVTQYWQGDEIRIGQVLNNLVGNGIKFTDQGEVRIRIRLAPD 615
           M + A   G++L  +  + +      D  ++ QVL NL+GNGIKFT +G V + + L   
Sbjct: 594 MVAGANLAGLSLRLNRPQ-LPACINIDGPKLRQVLFNLIGNGIKFTSEGSVSLNVSL--Q 650

Query: 616 GQGIRFAVEDSGIGIAEEEQATLFDAF-TQADAGRRKLGGTGLGLAISRKLVQAM---GG 671
           G  + F V D+G+GIA E +  LF  + T  + GR +  GTGLGLAI ++LV+ M   G 
Sbjct: 651 GGRLAFVVADTGVGIAPEVREQLFIPYSTLPNQGRSR--GTGLGLAICKQLVELMDANGR 708

Query: 672 ELQLASQLGQGSCFWFTLPL-PVGEPVETPALAVDDVPVANVLLVEDNEVNCLVAQGFLT 730
            + + S+ G+GS F F L      +  +   L    V    VL+VEDN+VN +VAQGFL 
Sbjct: 709 GIWVKSEPGKGSEFGFELCFTQCDKAQDAQTLVHKQVHTQRVLVVEDNKVNAMVAQGFLA 768

Query: 731 SLGHQVTLAKSVQEAKLCFQQQR-FDIALLDIHLPDGNGVDLLRDLRQMEDSIHNAVIPF 789
            LGH  TLA S Q A  C    + FD  +LDI L DG+GV LL  L+ +  + +   + F
Sbjct: 769 HLGHSSTLAASCQLALECVSADKAFDAVMLDIQLSDGSGVALLPQLKALFGAKN---VKF 825

Query: 790 IAVSAHVFNEEVAGYLAAGFDGYLPKPLVKEQLAAMLRQQLTAKSGDDADMRDKAESHDT 849
            A +A +  E+++ Y   GFD  L KPL  + L   L     A +    +      S   
Sbjct: 826 AAFTAQMQMEDLSLYREVGFDTVLAKPLSLQTLTQWLG---VAMASSSLETESPGLSASP 882

Query: 850 SSIFDNGQPQGEPSPEAQAV---RKEWVAVMDHAKFEQDVQILGVEKMREIVGYFEQGCA 906
           S I  +  P  + +  + A+    +    ++D  + +QD+++LGV+ + +++  ++   A
Sbjct: 883 SFISASSAPLAQATDTSGAIPLGNQATETLLDIEQLQQDIEVLGVKAVSDMLALYKTSSA 942

Query: 907 E-FFALCEAE-RDNDAQIKSQAHKLKGSAGALWLTQLYQLCQQIEK 950
           E    L EA   ++ A      H LKGS+ ++ L  L Q CQ  EK
Sbjct: 943 EQIERLSEATFVESSADSAKLLHALKGSSASMGLKALTQCCQVWEK 988