Pairwise Alignments

Query, 984 a.a., TMAO reductase system sensor histidine kinase/response regulator TorS from Vibrio cholerae E7946 ATCC 55056

Subject, 1188 a.a., sensory box histidine kinase/response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  226 bits (575), Expect = 9e-63
 Identities = 133/337 (39%), Positives = 196/337 (58%), Gaps = 7/337 (2%)

Query: 447 HKLNQEVLNHAKARQQAEQASRAKSAFLATMSHEIRTPMNGVLGTARLLQDTTLTSTQQH 506
           HK N+  L  AK  Q AE A+  KS FLA MSHEIRTPMN ++G  +L Q T+LT+ Q+ 
Sbjct: 653 HKSNEVALLEAK--QDAELANLYKSEFLANMSHEIRTPMNAIIGMLQLAQRTSLTAQQKD 710

Query: 507 YVQVINRSGRSLLAILNDVLDYSKIEAGHLEIHHTHFDLYRLVSETHELMQSRAREKGIT 566
           Y++    S +SLL I+ND+LD+SKIEAG LE+    F L +++    +L   +A+E+G+ 
Sbjct: 711 YLEKAGFSAQSLLRIINDILDFSKIEAGKLELERVPFPLDKVLDHALDLNALKAQEQGVE 770

Query: 567 LTYHIDEDVTQYWQGDEIRIGQVLNNLVGNGIKFTDQGEVRIRIRLAPDGQ---GIRFAV 623
           L  +         +GD +R+GQVL NL+ N +KFT  GE+ +      +      ++F V
Sbjct: 771 LLLYAPVTAGLILKGDPLRLGQVLINLLSNAVKFTQSGEIELGCEDVGERDHRITLKFWV 830

Query: 624 EDSGIGIAEEEQATLFDAFTQADAG-RRKLGGTGLGLAISRKLVQAMGGELQLASQLGQG 682
            D+GIGI++++Q  LFDAF QAD    RK GGTGLGL+IS+ LV  MGG++Q+ S+LG G
Sbjct: 831 RDTGIGISKDQQEKLFDAFAQADGSTTRKYGGTGLGLSISKHLVSMMGGKMQVQSELGVG 890

Query: 683 SCFWFTLPLPVGEPVETPALAV-DDVPVANVLLVEDNEVNCLVAQGFLTSLGHQVTLAKS 741
           S F FT+   + E  +   L V + +     L+V+DN     +    +     +V  A S
Sbjct: 891 STFSFTISFEIAEEAKIEPLVVPEKLNNLRTLVVDDNPTALQIYSALMRDFHFEVDTAAS 950

Query: 742 VQEAKLCFQQQRFDIALLDIHLPDGNGVDLLRDLRQM 778
             EA     +   D+ LLD  +P+ +G D++  +  M
Sbjct: 951 GAEALYKLSRDPIDLLLLDWMMPEMDGSDVISAIDTM 987



 Score = 66.2 bits (160), Expect = 1e-14
 Identities = 43/122 (35%), Positives = 66/122 (54%), Gaps = 3/122 (2%)

Query: 712  VLLVEDNEVNCLVAQGFLTSLGHQVTLAKSVQEAKLCFQQQRFDIALLDIHLPDGNGVDL 771
            VLLVEDN +N  VA   L S G++V +A + Q A      + FD  L+DI +P  +G+  
Sbjct: 1066 VLLVEDNFINQQVATELLKSAGYEVVVAGNGQIALDIVDSRPFDAVLMDIQMPVMDGLTA 1125

Query: 772  LRDLRQMEDSIHNAVIPFIAVSAHVFNEEVAGYLAAGFDGYLPKPLVKEQLAAMLRQQLT 831
             R LR+   +    V+P IA++AH  + +    LAAG + ++ KP+V  +L   L   + 
Sbjct: 1126 ARALRERYSA---DVLPIIAMTAHAMSGDREKSLAAGMNAHITKPIVLTELFETLTHWIK 1182

Query: 832  AK 833
             K
Sbjct: 1183 HK 1184