Pairwise Alignments

Query, 984 a.a., TMAO reductase system sensor histidine kinase/response regulator TorS from Vibrio cholerae E7946 ATCC 55056

Subject, 1767 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Shewanella sp. ANA-3

 Score =  251 bits (641), Expect = 3e-70
 Identities = 141/369 (38%), Positives = 225/369 (60%), Gaps = 12/369 (3%)

Query: 459  ARQQAEQASRAKSAFLATMSHEIRTPMNGVLGTARLLQDTTLTSTQQHYVQVINRSGRSL 518
            A+++A+ AS+AK  FLA MSHEIRTPMN ++G ++L   T L   Q++YV+ I R+ +SL
Sbjct: 1029 AKEEADAASKAKGDFLANMSHEIRTPMNAIIGMSQLCLQTALDKKQKNYVEKIERASKSL 1088

Query: 519  LAILNDVLDYSKIEAGHLEIHHTHFDLYRLVSETHELMQSRAREKGITLTYHIDEDVTQY 578
            L+I+ND+LD+SKIEAG L+I    F L  ++ +  ++   +A  K + L + +  +V ++
Sbjct: 1089 LSIINDILDFSKIEAGKLDIESVPFQLDTMLEDLSDMFSEKAAHKQLELLFAVAPNVPRH 1148

Query: 579  WQGDEIRIGQVLNNLVGNGIKFTDQGEVRIRIRLAP---DGQGIRFAVEDSGIGIAEEEQ 635
              GD +R+GQVL NL+ N IKFT++GEV + + L     D   +RF+V DSGIG+  ++Q
Sbjct: 1149 LFGDSLRLGQVLINLMNNAIKFTERGEVLLSLNLVEQQNDDVVLRFSVRDSGIGLTADQQ 1208

Query: 636  ATLFDAFTQADAG-RRKLGGTGLGLAISRKLVQAMGGELQLASQLGQGSCFWFTLPLPVG 694
            A LF +F+QAD    RK GGTGLGLAI ++LV+ MGG + + SQ G GS F+FT+ L + 
Sbjct: 1209 AKLFKSFSQADTSTTRKYGGTGLGLAICKQLVELMGGTIGVESQFGHGSTFYFTVKLQIS 1268

Query: 695  EPVE-TPALAVDDVPVANVLLVEDNEVNCLVAQGFLTSLGHQVTLAKSVQEAKLCFQQQR 753
               + T A  ++ +P   +L+ +DN     + +  L S+G +V   +S +EA     QQ 
Sbjct: 1269 SGQKLTVAQELEGMP---ILVADDNATARDIMRTTLESMGFRVDTVRSGEEAVTRCIQQE 1325

Query: 754  FDIALLDIHLPDGNGVDLLRDLRQMEDSIHNAVIPFIAVSAHVFNEEVAGYLAAGFDGYL 813
            + +AL+D  +P+ +G++  + ++Q            + VSAH   + ++     G  GY+
Sbjct: 1326 YAVALIDWKMPNLDGIETAKQIKQQAKKAPR----ILMVSAHANQDFLSQIEELGLAGYI 1381

Query: 814  PKPLVKEQL 822
             KP+   +L
Sbjct: 1382 SKPISASRL 1390



 Score = 71.2 bits (173), Expect = 6e-16
 Identities = 73/288 (25%), Positives = 122/288 (42%), Gaps = 31/288 (10%)

Query: 712  VLLVEDNEVNCLVAQGFLTSLGHQVTLAKSVQEAKLCFQQQRFDIALLDIHLPDGNGVDL 771
            +LLVEDNE+N  VA  FL  +G  +++A + Q A    +QQ FD+ L+D  +P  +G   
Sbjct: 1426 ILLVEDNEMNLEVATEFLEQVGIILSIATNGQIALDKLEQQSFDLVLMDCQMPVMDGYQA 1485

Query: 772  LRDLRQMEDSIHNAVIPFIAVSAHVFNEEVAGYLAAGFDGYLPKPLVKEQLAAMLRQQLT 831
             + LR+  +      +P +A++A+    +    L AG + ++ KP+       +L Q L 
Sbjct: 1486 TQALRKRPELTE---LPVVAMTANAMAGDKEMCLRAGMNDHIAKPIE----VNLLYQTLL 1538

Query: 832  AKSGDDADMRDKAESHDTSSI------FDNGQPQGEPSPEAQAVRKEWVAVMDHAKFEQD 885
               G  A + D  E      I       D+      P      + +    V +  +  Q 
Sbjct: 1539 KYLGGSASLVDNTEPSQLVDIPVKPINLDSESVVKWPEHPELDIDRGLQLVQNSTRLYQR 1598

Query: 886  VQILGVEKMREIVGYFEQGCAEFFALCEAERDNDAQIKSQAHKLKGSAGALWLTQLYQLC 945
                 V   R +V    +      AL   +RD+  ++   AH LKG AG L  ++L +L 
Sbjct: 1599 SFDRFVTSQRNVVDLINK------ALANDKRDDAVRM---AHTLKGLAGNLSSSKLVELA 1649

Query: 946  QQIEKADSPAAAYQQ---------TPLVDAVENAKQALRNALDLLSKE 984
            +Q+E   S  + YQ            + DA+E  K     +    S++
Sbjct: 1650 RQLELHLSEKSEYQTELDQIQALVASICDAIERVKPQFEESTTSTSEQ 1697