Pairwise Alignments

Query, 984 a.a., TMAO reductase system sensor histidine kinase/response regulator TorS from Vibrio cholerae E7946 ATCC 55056

Subject, 935 a.a., hybrid sensory histidine kinase BarA (RefSeq) from Shewanella sp. ANA-3

 Score =  234 bits (596), Expect = 3e-65
 Identities = 159/489 (32%), Positives = 254/489 (51%), Gaps = 29/489 (5%)

Query: 341 VLGLLGLVIVVWIVWKVVYRSVIQRLDQHTAALLSVAKGQLDVDVSTQGNDELGQMGQAI 400
           ++ L+G+ + +   +++V ++V Q + +    +  + +G+LD  +           G  I
Sbjct: 190 IIVLIGVQLNLLFTFRLV-KNVTQPITEMVRVVAKIREGKLDARLE----------GNLI 238

Query: 401 AHARDTAKALKVVAESEVLAKRELQQHKEHLEELVEQRTCQLSEMNHKLNQEVLNHAKAR 460
                  + +  +A S       L ++ + +++ ++Q T  L E   ++  + +    A+
Sbjct: 239 GELDLLKRGINAMAGS-------LSEYHDEMQQNIDQATSDLRETLEQIEIQNVELDLAK 291

Query: 461 QQAEQASRAKSAFLATMSHEIRTPMNGVLGTARLLQDTTLTSTQQHYVQVINRSGRSLLA 520
           ++A +ASR KS FLA MSHE+RTP+NGV+G AR L  T L S+Q  Y+  I RS  +LLA
Sbjct: 292 KRALEASRIKSEFLANMSHELRTPLNGVIGFARQLVKTPLHSSQVDYINTIERSATNLLA 351

Query: 521 ILNDVLDYSKIEAGHLEIHHTHFDLYRLVSETHELMQSRAREKGITLTYHIDEDVTQYWQ 580
           I+ND+LD+SK+EAG + + +  F L   + ET  L+   A+ KG+ L   I  +V     
Sbjct: 352 IINDILDFSKLEAGKMVLENMPFGLRETLGETITLISGSAQAKGLELVVDIAPNVPDNVN 411

Query: 581 GDEIRIGQVLNNLVGNGIKFTDQGEVRIRIRL---APDGQGIRFAVEDSGIGIAEEEQAT 637
           GD +R+ Q++NNLVGN IKFTD G V +++ L     D   +R  V D+GIGI E +Q  
Sbjct: 412 GDAMRVCQIINNLVGNAIKFTDSGSVLVKLELQNQTDDQVVLRCDVIDTGIGIDENQQDF 471

Query: 638 LFDAFTQADAG-RRKLGGTGLGLAISRKLVQAMGGELQLASQLGQGSCFWFTLPLPVGEP 696
           LF AF QAD+   R+ GGTGLGL I+++LV  MGG++   S + +GS FWFTLPL +G+ 
Sbjct: 472 LFQAFGQADSSISRRFGGTGLGLVITKRLVNQMGGQIGFTSSVDKGSNFWFTLPLGLGQF 531

Query: 697 VETPALAVDDVPVANVLLVEDNEVNCLVAQGFLTSLGHQVTLAKSVQE--AKLCFQQQRF 754
               +L  + +    VL  E   +   V    L     +VT  + +      L   + +F
Sbjct: 532 QIGDSLPFEKLKDKTVLFYEPRVLTHSVISRQLKQWDTKVTHHQHIPSLLTTLSTTEHQF 591

Query: 755 DIALLDIHLPDGNGVDLLRDLRQMEDSIHNAVIPFIAVSAHVFNEEVAGYLAAGFDGYLP 814
           D  LL  H    N   L+  L Q +      ++ F      V ++    ++    D  L 
Sbjct: 592 DYVLLSCH-GFSNPNQLVSTLNQAKSKTDCLIVLFDCQEQEVLSQ----FIRPNADVVLS 646

Query: 815 KPLVKEQLA 823
            P+ + QLA
Sbjct: 647 LPVSEHQLA 655



 Score = 75.1 bits (183), Expect = 2e-17
 Identities = 78/295 (26%), Positives = 122/295 (41%), Gaps = 48/295 (16%)

Query: 700 PALAVDDVPVAN----VLLVEDNEVNCLVAQGFLTSLGHQVTLAKSVQEAKLCFQQQRFD 755
           P +A+  VP A     VL V+DN  N  +    L  L   V    S +EA    + + FD
Sbjct: 669 PPVAIT-VPAARQSLTVLAVDDNFANLKLIDTLLNELVTTVIAVNSGEEAVKQAKSRTFD 727

Query: 756 IALLDIHLPDGNGVDLLRDLRQMEDSIHNAVIPFIAVSAHVFNEEVAGYLAAGFDGYLPK 815
           +  +DI +P  +G+   + +RQ      N   P IAV+AH   EE    L +G DGYLPK
Sbjct: 728 LIFMDIQMPGTDGISATKQIRQ---GSMNRNTPIIAVTAHAIAEERELILGSGMDGYLPK 784

Query: 816 PLVKEQLAAMLRQQLTAKSGDDADMRDKAESHDTSSIFDNGQPQGEPSPEAQAVRKEWVA 875
           P+ +  L A + + +T         R K    D  ++                    W  
Sbjct: 785 PIDEAALKAEINRWIT---------RPKFTHFDLHTL-------------------NWDL 816

Query: 876 VMDHAKFEQDVQILGVEKMREIVGYFEQGCAEFFALCEAERDND-AQIKSQAHKLKGSAG 934
            +  A  + D   L ++ +R ++    Q  +   A+  A   ND A + +  HKL G++ 
Sbjct: 817 CLTQANHKSD---LALDMLRMLLDSLPQTVS---AIETALSQNDQATMLTTIHKLHGASC 870

Query: 935 ALWLTQLYQLCQQIEKADSPAAAYQQ-----TPLVDAVENAKQALRNALDLLSKE 984
              +    +LCQ+IE A    A  +        L+D +   + A +  L  LS E
Sbjct: 871 YCGVPTTQRLCQEIESALKRDARVEDLEPEILELLDELTKVESAAKQVLSQLSAE 925