Pairwise Alignments

Query, 984 a.a., TMAO reductase system sensor histidine kinase/response regulator TorS from Vibrio cholerae E7946 ATCC 55056

Subject, 1236 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Shewanella sp. ANA-3

 Score =  226 bits (575), Expect = 1e-62
 Identities = 133/337 (39%), Positives = 196/337 (58%), Gaps = 7/337 (2%)

Query: 447  HKLNQEVLNHAKARQQAEQASRAKSAFLATMSHEIRTPMNGVLGTARLLQDTTLTSTQQH 506
            HK N+  L  AK  Q AE A+  KS FLA MSHEIRTPMN ++G  +L Q T+LT+ Q+ 
Sbjct: 701  HKSNEVALLEAK--QDAELANLYKSEFLANMSHEIRTPMNAIIGMLQLAQRTSLTAQQKD 758

Query: 507  YVQVINRSGRSLLAILNDVLDYSKIEAGHLEIHHTHFDLYRLVSETHELMQSRAREKGIT 566
            Y++    S +SLL I+ND+LD+SKIEAG LE+    F L +++    +L   +A+E+G+ 
Sbjct: 759  YLEKAGFSAQSLLRIINDILDFSKIEAGKLELERVPFPLDKVLDHALDLNALKAQEQGVE 818

Query: 567  LTYHIDEDVTQYWQGDEIRIGQVLNNLVGNGIKFTDQGEVRIRIRLAPDGQ---GIRFAV 623
            L  +         +GD +R+GQVL NL+ N +KFT  GE+ +      +      ++F V
Sbjct: 819  LLLYAPVTAGLILKGDPLRLGQVLINLLSNAVKFTQSGEIELGCEDVGERDHRITLKFWV 878

Query: 624  EDSGIGIAEEEQATLFDAFTQADAG-RRKLGGTGLGLAISRKLVQAMGGELQLASQLGQG 682
             D+GIGI++++Q  LFDAF QAD    RK GGTGLGL+IS+ LV  MGG++Q+ S+LG G
Sbjct: 879  RDTGIGISKDQQEKLFDAFAQADGSTTRKYGGTGLGLSISKHLVSMMGGKMQVQSELGVG 938

Query: 683  SCFWFTLPLPVGEPVETPALAV-DDVPVANVLLVEDNEVNCLVAQGFLTSLGHQVTLAKS 741
            S F FT+   + E  +   L V + +     L+V+DN     +    +     +V  A S
Sbjct: 939  STFSFTISFEIAEEAKVEPLVVPEKLNNLRTLVVDDNPTALQIYSALMRDFHFEVDTAAS 998

Query: 742  VQEAKLCFQQQRFDIALLDIHLPDGNGVDLLRDLRQM 778
              EA     +   D+ LLD  +P+ +G D++  +  M
Sbjct: 999  GAEALYKLSRDPIDLLLLDWMMPEMDGGDVISAIDTM 1035



 Score = 68.9 bits (167), Expect = 2e-15
 Identities = 48/146 (32%), Positives = 75/146 (51%), Gaps = 9/146 (6%)

Query: 695  EPVETPALAVDDVPVAN------VLLVEDNEVNCLVAQGFLTSLGHQVTLAKSVQEAKLC 748
            EP       +D++PV        VLLVEDN +N  VA   L S G++V +A + Q A   
Sbjct: 1091 EPRLNVVQPIDELPVEEGEHTGLVLLVEDNFINQQVATELLKSAGYEVVVAGNGQIALDI 1150

Query: 749  FQQQRFDIALLDIHLPDGNGVDLLRDLRQMEDSIHNAVIPFIAVSAHVFNEEVAGYLAAG 808
               + FD  L+DI +P  +G+   R LR+   +    V+P IA++AH  + +    LAAG
Sbjct: 1151 IDSRPFDAVLMDIQMPVMDGLTAARALRERFSA---DVLPIIAMTAHAMSGDREKSLAAG 1207

Query: 809  FDGYLPKPLVKEQLAAMLRQQLTAKS 834
             + ++ KP+V  +L   L   +  K+
Sbjct: 1208 MNAHITKPIVLTELFETLSHWIKHKN 1233