Pairwise Alignments

Query, 459 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., putative regulatory protein UhpC (RefSeq) from Shewanella amazonensis SB2B

 Score =  709 bits (1830), Expect = 0.0
 Identities = 339/444 (76%), Positives = 387/444 (87%)

Query: 1   MLNFFKTRPDLPLLSSSKAEMLKRYKSYQWQVFIGLIFGYAMFYVVRMALGVVKKPMLDA 60
           ML+FFKTRPD PL+  +  ++   YK YQWQVF+GL+ GYAMFYV RM+L V KKPMLDA
Sbjct: 1   MLDFFKTRPDQPLIEGTPEKIRSIYKKYQWQVFLGLVLGYAMFYVARMSLNVAKKPMLDA 60

Query: 61  GIVTLEELGIMGSAFFFTYAFGKFLNGFLSDYANIGRFMSFSLLLSGVASIFMGMNTVAF 120
           GIVTL+ELGI+GSAFF TYA GKF NGFLSDYANIGRFMS SL LS +  +FMGMNT  F
Sbjct: 61  GIVTLDELGIIGSAFFLTYAVGKFSNGFLSDYANIGRFMSVSLGLSAITCLFMGMNTATF 120

Query: 121 FFVLLWGLNGWFQSVGSAPSCVSIYQWFSPKQRGSRYSIWGGSRNIGEGITWILTASLVS 180
           FF+LLW +NGWFQSVGSAPSCVSI+QWFSPKQRGS YSIWGGSRNIGEGITWILTA++VS
Sbjct: 121 FFILLWAMNGWFQSVGSAPSCVSIFQWFSPKQRGSVYSIWGGSRNIGEGITWILTATVVS 180

Query: 181 YFGWRAGFIGAGIAGVVASLIMFKLLKDRPQTYGMPDPGTAFEEGTEIKKANDPKETRRA 240
           +FGWRAGF+GAGIA   A++ M+ +LKDRPQTYG+P+P  A+ E  EIKK  DPKE RRA
Sbjct: 181 FFGWRAGFVGAGIATFAAAIAMYFVLKDRPQTYGLPEPAVAYGEDAEIKKKVDPKEIRRA 240

Query: 241 QMFILKQPVVWLIALACAAMYISRYAMSSWAVLFLQEQKGYSLIDAGFAMSMYPTAGLAG 300
           Q+FILKQP VW+IALACAAMYISRYAMSSWAVL+LQE+KGYSLIDAGFAMS YP AG AG
Sbjct: 241 QLFILKQPTVWIIALACAAMYISRYAMSSWAVLYLQEEKGYSLIDAGFAMSAYPIAGFAG 300

Query: 301 AILSGILSDKVFKGNRNIPNLLYGLTNIAGMCLMFFGPDNRIVDAVALSMIGFSIGGLVV 360
           AIL+GI+SDKVF  NR+IP LLYGL NIAG+CLMF+GP +R++DAVAL +IG++IGGLVV
Sbjct: 301 AILAGIISDKVFNANRHIPTLLYGLANIAGLCLMFWGPQSRVMDAVALGLIGYAIGGLVV 360

Query: 361 FLAGLIACDLMPKNAVGAVKGLIGLCSYIAASAQELISASLITVTEVEGVKHYDFGNAQY 420
           FLAGL ACDLMPK AVGAVKG IGLCSYIAASAQE++SASLI + EV+GVKHYDF  AQY
Sbjct: 361 FLAGLTACDLMPKTAVGAVKGFIGLCSYIAASAQEIVSASLIKIHEVDGVKHYDFSTAQY 420

Query: 421 FWLAAGVVSVLLALTVWNAKKVVD 444
           FWLAA VVS+ LA++VWNAKKVVD
Sbjct: 421 FWLAAAVVSMFLAMSVWNAKKVVD 444