Pairwise Alignments

Query, 789 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 600 a.a., putative two-component sensor histidine kinase protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  147 bits (372), Expect = 1e-39
 Identities = 99/274 (36%), Positives = 152/274 (55%), Gaps = 13/274 (4%)

Query: 508 DQEHANRLLEQRVKEKTQSLREKNRELQAEVEERQRAEAHLKKTQGELIQAAKMAVVGQT 567
           ++ H+   ++Q   E  Q ++E+  EL+A       A   LK TQ ELIQAAK+ VVG  
Sbjct: 326 ERRHSLARMQQSRDELEQRVKERTAELEA-------ANTQLKDTQDELIQAAKLTVVGTM 378

Query: 568 MTSLAHELNQPLSAMSAYLFSARLALEEAPQAQLATSLDHIENLTERMGKIVNSLRHFAR 627
             S+ HELNQPL+A+ +Y  + +  LE     +   +L  I  LT+R+  IV   + F R
Sbjct: 379 SASINHELNQPLAAIRSYTQNTQTFLERDMPGRARENLAIILELTDRLADIVGQFKSFTR 438

Query: 628 KNSSDESLQPVRLNSVVEQALVLVQTKAKRQQIKL-INTLPDDLMVMADALSLEQVLINL 686
           K+   + +  V L + ++QAL +VQ +  +Q+ +L I+   + L V  D   L+QVL+NL
Sbjct: 439 KSQGKDGV--VMLANCLQQALTIVQPELDKQKAQLTIHCEDESLKVWCDGTRLQQVLVNL 496

Query: 687 IVNGCDASTTFAQPWVKLIALGTEQGMQRIAVIDSGQGFEHEVVDKLFTPFTTTKE-VGL 745
           I N  +A +      + +  LG +    RI   DSG G    +++K+F P+ TT E  GL
Sbjct: 497 ITNALNAMSQSPVKRLSISLLGGDPVTIRIQ--DSGPGVRDSLMEKIFEPYYTTSERQGL 554

Query: 746 GLGLSICQSLVEKMQGRIALASNLEKGAMVILEL 779
           GLGLSI + ++E MQG I +A+  E GA+  + L
Sbjct: 555 GLGLSISRRIIESMQGDIRVANAPEGGAIFDITL 588