Pairwise Alignments

Query, 789 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 508 a.a., PAS domain S-box protein from Rhodopseudomonas palustris CGA009

 Score =  124 bits (310), Expect = 2e-32
 Identities = 76/241 (31%), Positives = 130/241 (53%), Gaps = 6/241 (2%)

Query: 537 EVEERQRAEAHLKKTQGELIQAAKMAVVGQTMTSLAHELNQPLSAMSAYLFSARLALEEA 596
           ++ E Q+ +A L + Q EL+  +++  +G+  ++LAHELNQPLSA+S Y+  +R  L  +
Sbjct: 253 DLTEYQQTQARLHELQAELVHVSRLTAMGEMASALAHELNQPLSAISNYMKGSRRLLAGS 312

Query: 597 PQ---AQLATSLDHIENLTERMGKIVNSLRHFARKNSSDESLQPVRLNSVVEQALVLVQT 653
                 ++ ++++       R G+I+  LR F  +  S++ ++   L  ++E+A  L  T
Sbjct: 313 TDPNTVKIESAMERAAEQALRAGQIIRRLRDFVARGESEKRVES--LAKLIEEAGALGLT 370

Query: 654 KAKRQQIKL-INTLPDDLMVMADALSLEQVLINLIVNGCDASTTFAQPWVKLIALGTEQG 712
            A+ Q + L  N  P   +V+ D + ++QVL+NL  N  +A     +  +          
Sbjct: 371 GAREQGVVLRFNLDPAHDLVLVDRVQIQQVLVNLFRNALEAMANSDKKELSAGNARVADD 430

Query: 713 MQRIAVIDSGQGFEHEVVDKLFTPFTTTKEVGLGLGLSICQSLVEKMQGRIALASNLEKG 772
           M  + V D+G G   +V  KLF  F TTKE G+G+GLSI +S++E   GR+   +N   G
Sbjct: 431 MVEVTVSDTGSGLPEQVKAKLFQTFFTTKETGMGVGLSISRSIIEAHGGRMWAETNSAGG 490

Query: 773 A 773
           A
Sbjct: 491 A 491