Pairwise Alignments

Query, 789 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 713 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  125 bits (313), Expect = 1e-32
 Identities = 78/266 (29%), Positives = 139/266 (52%), Gaps = 10/266 (3%)

Query: 516 LEQRVKEKTQSLREKNRELQAEVEERQRAEAHLKKTQGELIQAAKMAVVGQTMTSLAHEL 575
           LE +V+E+T+SL+EK  ELQ  V       A L +T+ +L+   K+  +G+    +AHE+
Sbjct: 427 LEVKVEERTRSLQEKTEELQRNV-------ALLNETRQQLVTNEKLTALGELTAGIAHEI 479

Query: 576 NQPLSAMSAYLFSARLALEEAPQAQLATSLDHIENLTERMGKIVNSLRHFARKNSSDESL 635
           N P + +   +   +  L +  +  +   +D +     R+  I+ SL  ++R    +  L
Sbjct: 480 NNPTAVILGNMELLKSELGDKAE-DVEEEIDIVIEQVGRISTIIRSLLQYSRPGEFNAPL 538

Query: 636 QPVRLNSVVEQALVLVQTKAKRQQIKLINTLPDDLMVMADALSLEQVLINLIVNGCDAST 695
           +  +L  +VE+  +LV+   K+Q++ LI  L     +  +   L QVLINL+VN   A  
Sbjct: 539 EMHQLTPIVEEMAILVRHSIKKQEVVLIQDLNASYPIEVNRPQLLQVLINLVVNAAHAMD 598

Query: 696 TFAQPWVKLI--ALGTEQGMQRIAVIDSGQGFEHEVVDKLFTPFTTTKEVGLGLGLSICQ 753
              + W++      G E    +I V D G+G   E + ++F PF TT++ G GLGLS+  
Sbjct: 599 GQGRIWIRTYDWVQGGEPIGVKIEVEDEGKGIPEEQLGRIFDPFYTTRQDGTGLGLSLSY 658

Query: 754 SLVEKMQGRIALASNLEKGAMVILEL 779
            +++++ G I ++S + KG +  + L
Sbjct: 659 GIIKRIGGTIEVSSTVGKGTLFTIGL 684