Pairwise Alignments

Query, 789 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 498 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  115 bits (287), Expect = 7e-30
 Identities = 74/265 (27%), Positives = 139/265 (52%), Gaps = 14/265 (5%)

Query: 526 SLREKNRELQAEVEERQRAEAHLKKTQGELIQAAKMAVVGQTMTSLAHELNQPLSAMSAY 585
           +L E    L  E+  R+ AE   + ++ +L    ++  + +  +S+AHE+NQPL+A++ Y
Sbjct: 221 ALNEMQTRLAQELRLREEAEFDSRSSREQLAHMDRVTSMEEIASSIAHEINQPLTAIATY 280

Query: 586 LFSA---RLALEEAPQAQLATSLDHIENLTERMGKIVNSLRHFARKNSSDESLQPVRLNS 642
             +A       E  P+A L  +L+ I     R G+++ ++R F  K +S  S   + + +
Sbjct: 281 AQAALRTNKGDERVPEA-LINALEKITEQALRAGEVIRTIRQFISKQASSRS--EIGVKA 337

Query: 643 VVEQALVLVQTKAKRQQIKLINTLPDD-LMVMADALSLEQVLINLIVNGCDAST--TFAQ 699
           ++     L++T   + ++ L+  L D+ L V+ D + L+QVL NL+ N  +AS   +  +
Sbjct: 338 LLTSTSHLLETLESQYKVSLVQGLADERLTVIGDLVQLQQVLFNLLRNAMEASPPDSIIE 397

Query: 700 PWVKLIALGTEQGMQRIAVIDSGQGFEHEVVDKLFTPFTTTKEVGLGLGLSICQSLVEKM 759
            WV++           + + D G G + E   ++F PF TTK+ G+G+GL+IC+++++  
Sbjct: 398 IWVEVCG-----DKVSLRIRDRGCGIDAEAAKEIFAPFFTTKQEGMGMGLAICKTIIDAH 452

Query: 760 QGRIALASNLEKGAMVILELQQDEK 784
            G +  + N   G    + L Q EK
Sbjct: 453 NGELLFSINEFGGCDFTMLLPQGEK 477