Pairwise Alignments

Query, 789 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 601 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  111 bits (277), Expect = 1e-28
 Identities = 73/235 (31%), Positives = 127/235 (54%), Gaps = 6/235 (2%)

Query: 529 EKNRELQAEVEERQRAEAHLKKTQGELIQAAKMAVVGQTMTSLAHELNQPLSAMSAYLFS 588
           ++ + L  E+   Q  +  L + Q +  +A ++ + G+  + +AHEL QPL+ +  YL  
Sbjct: 339 KRTQALSDEITHHQHTQKILLEQQQQFYRAQRVLLTGEMASGIAHELKQPLAGIR-YLTQ 397

Query: 589 ARLALEEAPQAQLATSLDHIENLTERMGKIVNSLRHFARKNSSDESLQPVRLNSVVEQAL 648
             L   +  QA+LAT+L+ + +  +R    ++ LR F ++ S  +S     L +V+E+ L
Sbjct: 398 GCLYRLDNTQAELATALNKVISQVDRAQTTIHRLRTFCQQTSDYQSCD---LRTVIEETL 454

Query: 649 VLVQTKAKRQQIKLINTLPDDLMVMADALSLEQVLINLIVNGCDASTTFAQPWVKLIALG 708
            L+Q + +R ++     L   L V ADA  ++QVL+NL+ N  DA  +  Q  +  I  G
Sbjct: 455 TLMQPEFQRLKLSPKVNL-QALPVFADASLMQQVLVNLLRNALDAMESIPQKSL-FIDTG 512

Query: 709 TEQGMQRIAVIDSGQGFEHEVVDKLFTPFTTTKEVGLGLGLSICQSLVEKMQGRI 763
                  I + D+G G     + +LF PF T+K  GLGLG+ IC+ ++E+ +G+I
Sbjct: 513 ITGENVYIHITDAGCGLSDSALKRLFFPFETSKPQGLGLGMVICKRIIEEHKGKI 567