Pairwise Alignments

Query, 789 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 669 a.a., two-component sensor histidine kinase from Klebsiella michiganensis M5al

 Score =  178 bits (451), Expect = 1e-48
 Identities = 103/253 (40%), Positives = 153/253 (60%), Gaps = 6/253 (2%)

Query: 527 LREKNRELQAEVEERQRAEAHLKKTQGELIQAAKMAVVGQTMTSLAHELNQPLSAMSAYL 586
           L  + ++L+ E+ ER+  EA L+ TQ ELIQ AK+AVVGQTMT+LAHE+NQPL+A+S YL
Sbjct: 412 LNAQKQQLEQEIGERKTIEADLRATQDELIQTAKLAVVGQTMTTLAHEINQPLNALSMYL 471

Query: 587 FSARLALEEAPQAQLATSLDHIENLTERMGKIVNSLRHFARKNSSDESLQPVRLNSVVEQ 646
           F+A  A+E+   AQ   +L   E L  R+  I+ SLR F R+   +  L PV L      
Sbjct: 472 FTAGRAIEQGQTAQARATLSKAEGLINRIDAIIRSLRQFTRRAELETPLHPVDLRQTFMV 531

Query: 647 ALVLVQTKAKRQQIKLINTLPDD-LMVMADALSLEQVLINLIVNGCDASTTFAQPWVKLI 705
           A  L+  + + QQ  L+  +PD+ + +  D + + QVL+N++ N  DA    A+  V   
Sbjct: 532 AWELLAMRHRPQQGTLV--VPDETVWIRGDEVRVHQVLVNVLSNALDACPNAAKITVSWQ 589

Query: 706 ALGTEQGMQRIAVIDSGQGFEHEVVDKLFTPFTTTKEVGLGLGLSICQSLVEKMQGRIAL 765
             G       + + D+G G+   ++  L  PFTT+K+VGLG+GLSIC SL+ +M+G + L
Sbjct: 590 MNGDTLS---VLIADNGPGWPAALLPSLLKPFTTSKDVGLGIGLSICVSLMTQMEGTLRL 646

Query: 766 ASNLEKGAMVILE 778
           AS L + A V+L+
Sbjct: 647 ASTLTRNACVVLQ 659



 Score = 78.2 bits (191), Expect = 1e-18
 Identities = 82/402 (20%), Positives = 172/402 (42%), Gaps = 41/402 (10%)

Query: 8   TIGARLLLAFAFSTSLLTIVSLVAWGTWSRLDYQVAELLNQSVPKYNTSYVLETRSSEIR 67
           +I   L  AF     L  IVS V+  +W     Q+   L++  P+ ++++++E   + + 
Sbjct: 14  SISTSLRGAFLMGALLTLIVSGVSLYSWHEQSSQIRYSLDEYFPRIHSAFLIEGNLNLVV 73

Query: 68  RRIQ---LIVSATSKVTLNQQYQRLQEDFTAIHAALASLPQNEQQAALQQGYTELRQTTQ 124
            ++    L  + T ++ L  Q  +  +    +   L+   + +    LQ     L +  +
Sbjct: 74  DQLNEFLLAPNTTVRLQLRNQIIQHLDKIERLSQGLSPAERQQLAVILQDSRALLSELDR 133

Query: 125 QINDLVSARIDVDRRLALFAEQLDWLHQDIGMELSPMRQELQWQ---------------- 168
            + ++   R     ++   + ++DWLH D   EL+ + Q+  WQ                
Sbjct: 134 VLYNMFLVR----EKVGELSARIDWLHDDFTTELNSLVQDFTWQQGTLLDQIEARQGDAA 189

Query: 169 --LERGGAAQPQAQVMFQTINLIQTILDGETQAFLFVDELLKAKHLTQVDNGMRV---LQ 223
             L+R    Q + Q ++    +   I+D         D L + K  +  D+GM V   ++
Sbjct: 190 QYLKRSREVQNEQQQVYTLARIENQIVDD------LRDRLNELK--SGNDDGMLVETHIR 241

Query: 224 YRLDELSRLS----QPLFTQPSSIAYQQLLEEWRNVLRLEGDFQQSLRDRVVLTQKLEST 279
           Y L+ L + S    + L   PS+I  +Q ++E   +  ++     ++RD V   + L   
Sbjct: 242 Y-LENLKKTSDENIRALDDWPSTITLRQTIDELLEIGMVKNKMPDTMRDYVTAQKALVDA 300

Query: 280 SEQLQIQLDQQHTAIADLVANADALFVQVKGQTAQLVQEGNRVLLICFGLSIGLSLLLMY 339
           S   +  L +  T +   + ++         +  Q+V+    ++L+   L++ L+ +L +
Sbjct: 301 SRAREATLGRFRTLLEAQLGSSHQQMQMFNQRMGQIVRVSGGLILVATLLALLLAWVLNH 360

Query: 340 YFVHKRIVGRLHRLSESLDAIIHNDLSHPITVDGKDEIGALS 381
           YF+  R+V R   L++++  I        I V G+DE+G ++
Sbjct: 361 YFIRSRLVKRFTALNQAVVQIGLGRTDATIPVYGRDELGRIA 402



 Score = 31.6 bits (70), Expect = 1e-04
 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 5/73 (6%)

Query: 275 KLESTSEQLQIQLDQQHTAIADLVANADALFVQVKGQTAQLVQEGNRVLLICFGLSIGLS 334
           +L +  +QL+ ++ ++ T  ADL A  D L      QTA+L   G  +  +   ++  L+
Sbjct: 411 QLNAQKQQLEQEIGERKTIEADLRATQDELI-----QTAKLAVVGQTMTTLAHEINQPLN 465

Query: 335 LLLMYYFVHKRIV 347
            L MY F   R +
Sbjct: 466 ALSMYLFTAGRAI 478



 Score = 26.6 bits (57), Expect = 0.005
 Identities = 28/141 (19%), Positives = 57/141 (40%), Gaps = 26/141 (18%)

Query: 505 DVTDQEHANRLLEQRVKEKTQSLREKNRELQAEVEERQRAEAH------LKKTQGELIQA 558
           +V +++     L +   +    LR++  EL++  ++    E H      LKKT  E I+A
Sbjct: 197 EVQNEQQQVYTLARIENQIVDDLRDRLNELKSGNDDGMLVETHIRYLENLKKTSDENIRA 256

Query: 559 A--------------KMAVVGQTMTSLAHELNQPLSAMSAYLFSARLA------LEEAPQ 598
                          ++  +G     +   +   ++A  A + ++R             +
Sbjct: 257 LDDWPSTITLRQTIDELLEIGMVKNKMPDTMRDYVTAQKALVDASRAREATLGRFRTLLE 316

Query: 599 AQLATSLDHIENLTERMGKIV 619
           AQL +S   ++   +RMG+IV
Sbjct: 317 AQLGSSHQQMQMFNQRMGQIV 337