Pairwise Alignments

Query, 439 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., Nitrogen regulation protein NR(I) from Pseudomonas fluorescens FW300-N2E2

 Score =  196 bits (498), Expect = 1e-54
 Identities = 136/447 (30%), Positives = 225/447 (50%), Gaps = 38/447 (8%)

Query: 20  MKSTVLLIDDDQDVLDSYLHLMSIAGLTAKAVIDPTQAMSHIQPDWNGVVLLDMYMPQLH 79
           M  +V+++DD+  +  +    +S++G   +      + ++ +   + GV+L D+ MP L 
Sbjct: 1   MLDSVMVVDDEGSIRSAVEQWLSLSGFQVQLFARADECLARLPEHFPGVILSDVRMPGLS 60

Query: 80  GMELLKQIKAVDDKIPVIVITGHGDIPMAVEAVKMGACDFLEKPINPPQLLTLIKQHLEL 139
           G+ELL +++  D  +PVI++TGHGD+PMAVEA++ GA DFLEKP +P  LL  +++ L+ 
Sbjct: 61  GLELLAEVRRRDPDLPVILLTGHGDVPMAVEAMRDGAYDFLEKPFSPEALLGSLRRALDK 120

Query: 140 RRSFIEQKLLLSRSVKR-----ELVGKSAQMEQIRSHVAQYALLNRHVVIVGESGCGRHT 194
           R   +E + L  ++  R      L+G S  ++ +R  V   A L  +V+I GE+G G+  
Sbjct: 121 RTLVLENRRLHEQADARARLDGTLLGVSRALQNLRRQVLDLAALPVNVLIRGETGSGKEL 180

Query: 195 IAYLIHQLTTNNGHLPWVELVASAKTEWSTVEP-------------------KVQESAGG 235
           +A  +H   T    +P+V L  +A  E +  E                    K++ + GG
Sbjct: 181 VARCLHDFGT-RASMPFVALNCAAIPE-ALFEAELFGHESGAFTGAQGKRIGKLEYANGG 238

Query: 236 TLLIDHIELLSEEVQRNVVQSLLNQ--ERLNRPRT-----RVIAVIDQPPEQLIAQNQLL 288
           TL +D IE +    Q  +++ L  Q  ERL   ++     R+IA             +  
Sbjct: 239 TLFLDEIESMPLAQQVKLLRVLQEQKLERLGSNQSIQVDLRIIAATKPDLLDEARAGRFR 298

Query: 289 PELYYLLNQGQIDVPLLRQRPDDIAALFHYFLKQSCYKLGKPMPNVEPHYLALLRAHQWP 348
            +L Y LN  ++ +P LR+R +DI  LF +F   +  +LG+    +    L+ L +H WP
Sbjct: 299 EDLAYRLNIAELRLPPLRERREDIPLLFEHFTHSAAERLGRAAAPLSGPQLSHLLSHDWP 358

Query: 349 GNVRELRNVAELYAIGIVKLAGKERLYNQEEMLSPLDELVDDYEKQVIEDALFLFSGRVA 408
           GNVREL NVAE   +G+ +    E    Q      L    + +E Q +  AL    G V 
Sbjct: 359 GNVRELANVAERQVLGLDQPQALETEPGQS-----LAAQQEAFEAQCLRAALTRHKGDVK 413

Query: 409 DAANYLQVPRKKLYLRMKKHGLEKDAF 435
                LQ+PR+    +M++HGL ++ F
Sbjct: 414 AVLEELQLPRRTFNEKMQRHGLSREMF 440