Pairwise Alignments

Query, 439 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 463 a.a., C4-dicarboxylate transport transcriptional regulatory protein from Pseudomonas fluorescens FW300-N2E2

 Score =  225 bits (573), Expect = 3e-63
 Identities = 152/444 (34%), Positives = 233/444 (52%), Gaps = 40/444 (9%)

Query: 24  VLLIDDDQDVLDSYLHLMSIAGLTAKAVIDPTQAMSHIQPDWNGVVLLDMYMPQLHGMEL 83
           V+LIDDD  +  +    + +AGL    + +       +  DW GVV+ D+ MP + G+EL
Sbjct: 9   VVLIDDDPHLRQALSQTLDLAGLKILPLAEAKGVAGQLPRDWPGVVVSDIRMPGMDGLEL 68

Query: 84  LKQIKAVDDKIPVIVITGHGDIPMAVEAVKMGACDFLEKPINPPQLLTLIKQHLELRRSF 143
           L ++ A D ++PV++ITGHGD+P+AV+A++ GA DFLEKP     LL  +++ L LRR  
Sbjct: 69  LNELHAQDAELPVLLITGHGDVPLAVQAMRAGAYDFLEKPFASDHLLDSVRRALALRRLV 128

Query: 144 IEQK-LLLSRSVKRE----LVGKSAQMEQIRSHVAQYALLNRHVVIVGESGCGRHTIAYL 198
           ++ + L L+ S + E    LVG+S  M ++R  +   A     V+I+GE+G G+  +A  
Sbjct: 129 LDNRSLRLALSDRHELSARLVGQSTPMLRLREQIGALAATRADVLILGETGAGKEVVARA 188

Query: 199 IHQLTT-NNGHLPWVELVASAKTEWSTVEP-------------------KVQESAGGTLL 238
           +H L++  NG  P+V + A A  E S VE                    K + + GGTL 
Sbjct: 189 LHDLSSRRNG--PFVAINAGALAE-SVVESELFGHEPGAFTGAQKRRIGKFEFANGGTLF 245

Query: 239 IDHIELLSEEVQRNVVQSLLNQ--ERLNRPR-----TRVIAVIDQPPEQLIAQNQLLPEL 291
           +D IE +S +VQ  +++ L  +  ERL          RVIA   +   Q   Q +   +L
Sbjct: 246 LDEIESMSLDVQVKLLRLLQERVVERLGGNHQIPLDIRVIAATKEDLRQAADQGRFRADL 305

Query: 292 YYLLNQGQIDVPLLRQRPDDIAALFHYFLKQSCYKLGKPMPNVEPHYLALLRAHQWPGNV 351
           YY LN   + +P LR+R +D   LF +F  ++  + G P   ++P   ALL  H WPGNV
Sbjct: 306 YYRLNVAPLRIPPLRERGEDTLMLFQHFADEASARHGLPPHELQPAQRALLLRHSWPGNV 365

Query: 352 RELRNVAELYAIGIVKLAGKERLYNQ-----EEMLSPLDELVDDYEKQVIEDALFLFSGR 406
           REL+N AE +A+G+                 E +   L E V+++EK +I   L      
Sbjct: 366 RELQNAAERFALGLELALDNSAPDGNPGAPVELVSGGLSEQVENFEKTLIAAELARPHSS 425

Query: 407 VADAANYLQVPRKKLYLRMKKHGL 430
           V   A  L +PRK L+ +++KHGL
Sbjct: 426 VRSLAEALGIPRKTLHDKLRKHGL 449