Pairwise Alignments

Query, 439 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 447 a.a., two-component response regulator protein from Sinorhizobium meliloti 1021

 Score =  198 bits (504), Expect = 3e-55
 Identities = 137/449 (30%), Positives = 225/449 (50%), Gaps = 44/449 (9%)

Query: 21  KSTVLLIDDDQDVLDSYLHLMSIAGLTAKAVIDPTQAMSHIQPDWNGVVLLDMYMPQLHG 80
           +S +LL+DD++++  S    + +AG           A+  I   ++GVV+ D+ MP + G
Sbjct: 3   ESRILLVDDEEELRRSSAQALELAGFRVDTFASAEYALERIAFSFHGVVISDIRMPGMDG 62

Query: 81  MELLKQIKAVDDKIPVIVITGHGDIPMAVEAVKMGACDFLEKPINPPQLLTLIKQHLELR 140
           M  L++I+ +D ++PVI++TGHGD+ +AV A++ GA DF+EKP     L   I++ L+ R
Sbjct: 63  MTFLQRIREIDAELPVILVTGHGDVQLAVRAMREGAYDFVEKPFTAQMLAGSIRRALDWR 122

Query: 141 RSFIEQKLLLSRSVKRE-----LVGKSAQMEQIRSHVAQYALLNRHVVIVGESGCGRHTI 195
              +E + L + + KR+     L G+S  M  +R  +      +   +I+GE+G G+  +
Sbjct: 123 SLVLENRRLRAVAGKRDDIEQRLPGRSQAMVDLRYRIRAIGASDADTLIIGETGVGKEVV 182

Query: 196 AYLIHQLTTNNGHLPWVELVASA------KTEWSTVEP------------KVQESAGGTL 237
           A  +H L++     P++ +  +A      ++E    EP            K +   GGT+
Sbjct: 183 ARALHDLSSRASG-PFIAINCAALPENLIESELFGHEPGAFPGALRPRYGKFEHGRGGTI 241

Query: 238 LIDHIELLSEEVQRNVVQSLLNQ--ERLNRPRT-----RVIAVIDQPPEQLIAQNQLLPE 290
           L+D I  +  ++Q   ++ L  +   RL    T     R IA      E+ +A ++   +
Sbjct: 242 LLDEIGSMPFDLQAKFLRVLQERVITRLGSNETVPLDVRFIATSKVDLEREVASSRFRAD 301

Query: 291 LYYLLNQGQIDVPLLRQRPDDIAALFHYFLKQSCYKLGKPMPNVEPHYLALLRAHQWPGN 350
           L Y LN   + VP L QR  DI  LF   +++S  + G+    V P   + + A +WPGN
Sbjct: 302 LLYRLNVATLRVPTLSQRRSDIPLLFMQLVRESAARYGRDDIVVSPALASEMAAREWPGN 361

Query: 351 VRELRNVAELYAIGIVKLAGKERLYNQEEMLSP-----LDELVDDYEKQVIEDALFLFSG 405
           VRELRN AE   +G+           +EE L+P     L + V  +EK VI  AL    G
Sbjct: 362 VRELRNAAERLVLGLE--------VEREEALAPANGQRLTDKVAAFEKSVIASALAAHGG 413

Query: 406 RVADAANYLQVPRKKLYLRMKKHGLEKDA 434
            +      L + RK LY +M+K GL+K A
Sbjct: 414 ALKPVYESLGISRKTLYEKMQKFGLDKKA 442