Pairwise Alignments

Query, 439 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., C4-dicarboxylate transport transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  215 bits (547), Expect = 3e-60
 Identities = 138/448 (30%), Positives = 232/448 (51%), Gaps = 37/448 (8%)

Query: 23  TVLLIDDDQDVLDSYLHLMSIAGLTAKAVIDPTQAMSHIQPDWNGVVLLDMYMPQLHGME 82
           +V LIDDD+D+  +    + +AG T  +    T+A++ +  D+ G+V+ D+ MP + G+ 
Sbjct: 6   SVFLIDDDRDLRKAMQQTLELAGFTVSSFASATEALAGLSADFAGIVISDIRMPGMDGLA 65

Query: 83  LLKQIKAVDDKIPVIVITGHGDIPMAVEAVKMGACDFLEKPINPPQLLTLIKQHLELRRS 142
           L ++I A+D  +P+I++TGHGDIPMAV+A++ GA DF+ KP    +L+   ++  E RR 
Sbjct: 66  LFRKILALDPDLPMILVTGHGDIPMAVQAIQDGAYDFIAKPFAADRLVQSARRAEEKRRL 125

Query: 143 FIEQKLLL----SRSVKRELVGKSAQMEQIRSHVAQYALLNRHVVIVGESGCGRHTIAYL 198
            +E + L     + S    L+G++  ME++R  +   A  +  V++ GE+G G+  +A L
Sbjct: 126 VMENRSLRRAAEAASEGLPLIGQTPVMERLRQTLKHIADTDVDVLVAGETGSGKEVVATL 185

Query: 199 IHQ---------LTTNNGHLPWVELVASAKTEWSTVEP------------KVQESAGGTL 237
           +HQ         +  N G LP   +    ++E    EP            +++ ++GGTL
Sbjct: 186 LHQWSRRRTGNFVALNCGALPETVI----ESELFGHEPGAFTGAVKKRIGRIEHASGGTL 241

Query: 238 LIDHIELLSEEVQRNVVQSLLNQE------RLNRP-RTRVIAVIDQPPEQLIAQNQLLPE 290
            +D IE +    Q  +++ L  +E       L RP   RV+A          A+     +
Sbjct: 242 FLDEIEAMPPATQVKMLRVLEAREITPLGTNLTRPVDIRVVAAAKVDLGDPAARGDFRED 301

Query: 291 LYYLLNQGQIDVPLLRQRPDDIAALFHYFLKQSCYKLGKPMPNVEPHYLALLRAHQWPGN 350
           LYY LN   + +P LR+R DDI  LF +FL ++  + G+ +P +     A L  H WPGN
Sbjct: 302 LYYRLNVVTLSIPPLRERRDDIPLLFSHFLARASERFGREVPAISAAMRAYLATHSWPGN 361

Query: 351 VRELRNVAELYAIGIVKLAGKERLYNQEEMLSPLDELVDDYEKQVIEDALFLFSGRVADA 410
           VREL + AE  A+G+    G           + L E ++ YE  +++ AL    G V + 
Sbjct: 362 VRELSHFAERVALGVEGNLGVPAAAPASSG-ATLPERLERYEADILKQALTAHCGDVKET 420

Query: 411 ANYLQVPRKKLYLRMKKHGLEKDAFKAR 438
              L +PRK  Y ++++HG+ +  +  R
Sbjct: 421 LQALGIPRKTFYDKLQRHGINRADYVER 448