Pairwise Alignments

Query, 439 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 471 a.a., nitrogen assimilation regulatory protein NtrX from Phaeobacter inhibens DSM 17395

 Score =  162 bits (410), Expect = 2e-44
 Identities = 122/452 (26%), Positives = 226/452 (50%), Gaps = 47/452 (10%)

Query: 22  STVLLIDDDQDVLDSYLHLMSIAGLTAKAVIDPTQAMSHIQPDWNGVVLLDMYMP--QLH 79
           S +L++DD++D+ +    ++   G   +      + M+ +      +++LD+++   Q+ 
Sbjct: 2   SDILIVDDERDIRELVSDILEDEGYATRKAGSSEECMAALNEAPPALMVLDIWLKDSQMD 61

Query: 80  GMELLKQIKAVDDKIPVIVITGHGDIPMAVEAVKMGACDFLEKPINPPQLLTLIKQHLE- 138
           G+++LK +K  + +IPV++I+GHG+I +AV A+K GA DF+EKP N  QLL +I++ +E 
Sbjct: 62  GIDILKVVKRDNPEIPVVIISGHGNIEIAVAAIKQGAYDFIEKPFNIDQLLVVIRRAMET 121

Query: 139 --LRRSFIEQKLLLSRSVKRELVGKSAQMEQIRSHVAQYALLNRHVVIVGESGCGRHTIA 196
             LRR   + K     S   E++G SA    + S + +    N  V++ G +G G+   A
Sbjct: 122 SKLRRENTDLK--RQDSGASEMIGASAAYRALVSQLDKVTKSNGRVMLTGPAGSGKEIAA 179

Query: 197 YLIHQLTTNNGHLPWV-------------ELVASAKTEWSTVEPKVQESA-GGTLLIDHI 242
             IH   +N    P+V             E++   ++    VEP + E A GG +  D +
Sbjct: 180 RYIH-TQSNRASAPFVTVNCASIEPDRMEEVLFGRESAERGVEPGLLEQAHGGVVFFDEV 238

Query: 243 ELLSEEVQRNVVQSLLNQERLN-------RPRTRVIAVIDQPPEQLIAQNQLLPELYYLL 295
             +    Q  +++ L++Q+          R   RVI+  ++  E+ I  ++   ELY+ L
Sbjct: 239 ADMPLGTQSKILRVLVDQQFQRVGGSDKVRVDLRVISATNKDLEREIEADRFRQELYHRL 298

Query: 296 NQGQIDVPLLRQRPDDIAALFHYFLKQSCYKLGKPMPNVEPHYLALLRAHQWPGNVRELR 355
           N   I VP L  R +DI  L  +F++Q     G P+  +    +AL++   WPGNVR+L+
Sbjct: 299 NVVPIPVPSLADRREDIPLLADHFIEQFNQSQGLPLRRLSEDAVALMQTMLWPGNVRQLK 358

Query: 356 NVAELYAIGIVKLAG---KERLYNQEEMLS--------------PLDELVDDYEKQVIED 398
           N+ E   I + + +G    + L  +EE +               PL E  + +E++ +  
Sbjct: 359 NMVERVLI-LGENSGPIEPKDLPREEEAVEDQSRVVLSGALATLPLREAREAFEREYLLT 417

Query: 399 ALFLFSGRVADAANYLQVPRKKLYLRMKKHGL 430
            +  F G ++  A+++ + R  L+ ++K  G+
Sbjct: 418 QINRFGGNISRTASFVGMERSALHRKLKSLGV 449