Pairwise Alignments

Query, 439 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., sigma-54-dependent Fis family transcriptional regulator from Pedobacter sp. GW460-11-11-14-LB5

 Score =  155 bits (391), Expect = 3e-42
 Identities = 117/447 (26%), Positives = 212/447 (47%), Gaps = 46/447 (10%)

Query: 24  VLLIDDDQDVLDSYLHLMSIAGLTAKAVIDPTQAMSHIQPDWNGVVLLDMYMPQLHGMEL 83
           +L+++DD          ++  G     V    Q+   ++ +   ++L+D  +P   G+E+
Sbjct: 4   ILILEDDTTFAQLLEGFLTKNGHEITLVTQVKQSFKQVENNEFDLLLIDYRLPDGTGLEV 63

Query: 84  LKQIKAVDDKIPVIVITGHGDIPMAVEAVKMGACDFLEKPINPPQLLTLIKQHLELR-RS 142
           L  I+ +   IP IV+T   D+  AV ++++GA D++ KP+NP +LL +IK  L  +   
Sbjct: 64  LSHIRDLGLSIPAIVMTSFNDVRTAVRSIQLGAFDYITKPVNPDELLMVIKNSLTKKDLK 123

Query: 143 FIEQKLLLSRSVKRELVGKSAQMEQIRSHVAQYALLNRHVVIVGESGCGRHTIAYLIHQL 202
            +E K   S  +K    GKSA  +++  H+   A  +  V+I GESG G+   A  +HQ 
Sbjct: 124 SVEPKETNSDFIK----GKSAIADKLYEHINLVAPTDMSVIIQGESGTGKEFAARTLHQ- 178

Query: 203 TTNNGHLPWVELVASAKTE------------------WSTVEPKVQESAGGTLLIDHIEL 244
            +     P+V +   A ++                   +  + + + + GGTL +D +  
Sbjct: 179 QSKRADKPFVAIDCGALSKDLAASELFGHVKGAFTGALNDKKGQFEAANGGTLFLDEVGN 238

Query: 245 LSEEVQRNVVQSLLNQERLNRP---------RTRVIAVIDQPPEQLIAQNQLLPELYYLL 295
           LS EVQ  ++++L  QER+ +P           R+I   +      + Q +   +LY+ L
Sbjct: 239 LSYEVQIKLLRAL--QERVIQPLGSTKQIPVNVRIITATNDDLANSMQQGEFREDLYHRL 296

Query: 296 NQGQIDVPLLRQRPDDIAALFHYFLKQSCYKLGKPMPNVEPHYLALLRAHQWPGNVRELR 355
           N+ +I +P LR R  D+    ++F++ S   L + + +V     ALL ++ WPGN+REL 
Sbjct: 297 NEFKIQLPPLRDRGGDLELFINHFIQLSNRDLERNVKSVSSEAKALLLSYDWPGNLRELS 356

Query: 356 NVAELYA------IGIVKLAGKERLYNQEEMLSP-----LDELVDDYEKQVIEDALFLFS 404
           NV +         +  +     E + +     +P     L  + +  EK +I + L    
Sbjct: 357 NVIKRMVLLSPGDVAQINALPDEMMISVHHQSAPGNSSDLKAVNEQNEKALITETLIKVR 416

Query: 405 GRVADAANYLQVPRKKLYLRMKKHGLE 431
              + AA  L + RK LY +M+++G+E
Sbjct: 417 HNKSKAAKILNIDRKTLYAKMERYGIE 443