Pairwise Alignments

Query, 439 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Dechlorosoma suillum PS

 Score =  215 bits (547), Expect = 3e-60
 Identities = 141/436 (32%), Positives = 237/436 (54%), Gaps = 30/436 (6%)

Query: 24  VLLIDDDQDVLDSYLHLMSIAGLTAKAVIDPTQAMSHIQPDWNGVVLLDMYMPQLHGMEL 83
           VLL++DD DV       + +  +   +V    +A   +  D+ G+V+ D+ +P + GM L
Sbjct: 9   VLLVEDDPDVRLGCEQALQLEDIPVSSVDSAEKARRRLTRDFPGIVVSDIRLPGMDGMAL 68

Query: 84  LKQIKAVDDKIPVIVITGHGDIPMAVEAVKMGACDFLEKPINPPQLLTLIKQHLELRRSF 143
           LK+++A+D ++PV++ITGHGD+ +AV+A+K GA DF+EKP +P  L+ ++++ L+ RR  
Sbjct: 69  LKELQAIDPELPVVLITGHGDVSLAVQAMKGGAHDFIEKPFSPDYLVEVVRRALDKRRLT 128

Query: 144 IEQKLLLSRSVKRE-----LVGKSAQMEQIRSHVAQYALLNRHVVIVGESGCGRHTIAYL 198
           +E + L +R   R+     L+G+S  M ++R  VA        ++I GE+G G+   A  
Sbjct: 129 LEVRQLRARLESRDTLEARLIGRSPAMVKVRQLVADLGNSAADILIFGETGTGKELAARC 188

Query: 199 IHQ---------LTTNNGHLPWV----ELVASAKTEWSTVEP----KVQESAGGTLLIDH 241
           +H+         +  N G LP      E+       ++        K++ ++GGTL +D 
Sbjct: 189 LHEAGPRRNGNFVAINCGGLPETLFESEIFGHEAGAYTGAAKKRIGKIEHASGGTLFLDE 248

Query: 242 IELLSEEVQRNVVQSLLNQ--ERL--NRP---RTRVIAVIDQPPEQLIAQNQLLPELYYL 294
           IE +   +Q  +++ L  +  ERL  N P     RVIA      ++L  Q +   +LYY 
Sbjct: 249 IESMPMAMQIKLLRVLQERSLERLGSNTPIPVDCRVIAATKADLKELSDQGRFRADLYYR 308

Query: 295 LNQGQIDVPLLRQRPDDIAALFHYFLKQSCYKLGKPMPNVEPHYLALLRAHQWPGNVREL 354
           LN   + +P LR+R +DI  LF +FL Q+  +  +P+P  +P  +  L A+ WPGNVREL
Sbjct: 309 LNVATLPLPPLRERREDIPLLFEHFLLQAAARHERPVPAADPARMGPLLAYDWPGNVREL 368

Query: 355 RNVAELYAIGIVKLAGKERLYNQEEMLSPLDELVDDYEKQVIEDALFLFSGRVADAANYL 414
           RNVA+   +GI          +  +  S L E VD +E+ +I +AL    G +A  A  L
Sbjct: 369 RNVADRCVLGIEAGVAPFTAESPTQKRS-LAETVDSFERALITEALERNQGSLARTAEDL 427

Query: 415 QVPRKKLYLRMKKHGL 430
           ++ +  L+ +++K+GL
Sbjct: 428 RIAKTTLHDKIRKYGL 443