Pairwise Alignments

Query, 439 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 448 a.a., response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Dechlorosoma suillum PS

 Score =  205 bits (522), Expect = 2e-57
 Identities = 140/442 (31%), Positives = 232/442 (52%), Gaps = 32/442 (7%)

Query: 24  VLLIDDDQDVLDSYLHLMSIAGLTAKAVIDPTQAMSHIQPDWNGVVLLDMYMPQLHGMEL 83
           V L++DD  V       +++AGL  ++  D   A++ +  +  G V+ D+ +P   G+ L
Sbjct: 9   VFLVEDDPAVRMGSAQALTLAGLEVRSFADAEGALAALAAELPGAVVSDVRLPGRDGIAL 68

Query: 84  LKQIKAVDDKIPVIVITGHGDIPMAVEAVKMGACDFLEKPINPPQLLTLIKQHLELRRSF 143
           L +++ +D ++PVI++TGHGD+ MAV+A++ GA DF+EKP     L+ + +Q LE R   
Sbjct: 69  LGELRQLDRELPVILVTGHGDVAMAVQAMRDGAHDFIEKPFTSEHLVRVTRQALEKRALL 128

Query: 144 IEQKLLLSRSVKRE---LVGKSAQMEQIRSHVAQYALLNRHVVIVGESGCGRHTIAYLIH 200
           +E + L      ++   ++G++  M+++R  VA  A  +  ++I GE+G G+  +A  IH
Sbjct: 129 LENRRLKEALPTQDGLPVIGQTPAMQEVRRLVAALAPTDVDILINGETGSGKEVVARAIH 188

Query: 201 QLTTNNGHLPWVELVASAKTEWSTVEP-------------------KVQESAGGTLLIDH 241
             +   G  P+V +  +A  E S  E                    K++ + GGTL +D 
Sbjct: 189 SASGRRG--PFVAINCAALPE-SVFESEMFGHEAGAFTGAGKRRIGKIEYAHGGTLFLDE 245

Query: 242 IELLSEEVQRNVVQSLLNQ--ERL--NRP---RTRVIAVIDQPPEQLIAQNQLLPELYYL 294
           IE +   +Q  ++++L  +  ERL  N P     RV+A      + L    Q   +LYY 
Sbjct: 246 IESMPLNLQVKLLRALQERSIERLGGNAPVAVDCRVVAASKADLKALSEAGQFRADLYYR 305

Query: 295 LNQGQIDVPLLRQRPDDIAALFHYFLKQSCYKLGKPMPNVEPHYLALLRAHQWPGNVREL 354
           LN   ID+P LR+R +DI  L  +FL+Q+  + G+ +P   P  LA  +A  WPGNVREL
Sbjct: 306 LNVVSIDLPPLRRRQEDIPLLMGHFLQQAAKRFGREVPAWGPAELARWQAQPWPGNVREL 365

Query: 355 RNVAELYAIGIVKLAGKERLYNQEEMLSPLDELVDDYEKQVIEDALFLFSGRVADAANYL 414
           +N AE + +G+ +        +      PL   ++  E+  IE AL    G VA AA  L
Sbjct: 366 KNAAERFCLGLDQPQAASPAGSAPGAELPLARRLELAEQGFIEAALAACHGNVALAAERL 425

Query: 415 QVPRKKLYLRMKKHGLEKDAFK 436
           Q+P+K LY ++ +  +  D F+
Sbjct: 426 QLPKKTLYDKLARLQIAADTFR 447