Pairwise Alignments

Query, 439 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 453 a.a., response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Dechlorosoma suillum PS

 Score =  162 bits (410), Expect = 2e-44
 Identities = 130/448 (29%), Positives = 210/448 (46%), Gaps = 40/448 (8%)

Query: 24  VLLIDDDQDVLDSYLHLMSIAGLTAKAVIDPTQAMSHIQPDWNGVVLLDMYMPQLHGMEL 83
           +LL+DDD D+L      ++ AG   +      QA+   Q     +V+ D+ M  + G+ L
Sbjct: 4   LLLVDDDADILKLLALRLATAGHRVRTADSGEQALVMFQAQRPQLVITDLKMGGMDGLAL 63

Query: 84  LKQIKAVDDKIPVIVITGHGDIPMAVEAVKMGACDFLEKPINPPQLLTLIKQHLELRRSF 143
             +I+     +PVIV+T HG IP AV+A + G   FL KP +   LL  ++Q L L  S 
Sbjct: 64  FDEIQRRAPTLPVIVLTAHGTIPEAVDATRRGVFGFLTKPFDGKALLEQVEQALRL-ASP 122

Query: 144 IEQKLLLSRSVKRELVGKSAQMEQIRSHVAQYALLNRHVVIVGESGCGRHTIAYLIHQLT 203
             Q    +   + +LVG S  M+++       A  +  V I G SG G+  +A  IH L 
Sbjct: 123 AGQGGGENEPWRADLVGGSPAMQELLERARLVAASDASVFIAGASGTGKELLARAIH-LA 181

Query: 204 TNNGHLPWVELVASAKTE----------------WSTVEPK--VQESAGGTLLIDHIELL 245
           +     P+V +  +A  E                 +T   K    E+ GGT+ +D I  +
Sbjct: 182 SPRADKPFVAINCAAIPENLLESELFGHRKGAFTGATYNHKGLFLEADGGTVFLDEIGDM 241

Query: 246 SEEVQRNVVQSLLNQERLNRP---------RTRVIAVIDQPPEQLIAQNQLLPELYYLLN 296
              +Q  +++ L  QER  RP           RV++   +  ++L+   Q   +LYY LN
Sbjct: 242 PLSLQAKLLRVL--QERQVRPVGATQAVPVDVRVVSATHRDLDELLKSGQFREDLYYRLN 299

Query: 297 QGQIDVPLLRQRPDDIAALFHYFLKQSCYKLGKPMPNVEPHYLALLRAHQWPGNVRELRN 356
              + +PLL +R +DI  L ++FL+++  + GKP+    P  +  L    WPGNVR+L+N
Sbjct: 300 VVSLALPLLAERREDIPLLANHFLQRTASRYGKPVTAFAPDAMEALVTAPWPGNVRQLQN 359

Query: 357 VAELYAIGIVKLAG--------KERLYNQEEMLSPLDELVDDYEKQVIEDALFLFSGRVA 408
           V E  A+ +  ++G        +  L + +   + LDE    +E+  +   L L  G V 
Sbjct: 360 VVE-QAVALSPVSGGLVPAALIQGALRSGDSAFTSLDEAKKVFERDYLVRLLRLTEGSVT 418

Query: 409 DAANYLQVPRKKLYLRMKKHGLEKDAFK 436
            AA   Q  R + Y  +++H L+   FK
Sbjct: 419 QAARLAQRNRTEFYKLLERHQLDAKQFK 446