Pairwise Alignments

Query, 439 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 416 a.a., hypothetical protein from Klebsiella michiganensis M5al

 Score =  303 bits (775), Expect = 9e-87
 Identities = 168/414 (40%), Positives = 251/414 (60%), Gaps = 6/414 (1%)

Query: 23  TVLLIDDDQDVLDSYLHLMSIAGLTAKAVIDPTQAMSHIQPDWNGVVLLDMYMPQLHGME 82
           ++LLIDDD DVLD+Y  L+  AG    A  +P  A   +Q DW G+VL D+ MP   G++
Sbjct: 7   SILLIDDDADVLDAYTQLLEQAGYHVHACDNPFAAREWVQKDWPGIVLSDVCMPGCSGID 66

Query: 83  LLKQIKAVDDKIPVIVITGHGDIPMAVEAVKMGACDFLEKPINPPQLLTLIKQHLELRRS 142
           L+      D+++P+++ITGHGD+PMAV+AVK GA DFL+KP++P +LL+L+   L  R+S
Sbjct: 67  LMTLFHQDDEQLPIVLITGHGDVPMAVDAVKKGAWDFLQKPVDPGKLLSLVDAALRQRQS 126

Query: 143 FIEQKLLLSRSVKRELVGKSAQMEQIRSHVAQYALLNRHVVIVGESGCGRHTIAYLIHQL 202
            I ++    ++++ ELVG+S  +EQ R  + Q A  +  V + GE G GR T A  +HQL
Sbjct: 127 VIARRQYGQQTLRVELVGRSQWLEQYRQRLQQLAETDIAVWLYGEPGTGRMTGARYLHQL 186

Query: 203 TTNNGHLPWVELVASAKTEWSTVEPKVQESAGGTLLIDHIELLSEEVQRNVVQSLLNQER 262
             +N   P++    +        EP + ++ GGTL++ H E L+ E Q  +VQS    + 
Sbjct: 187 -GHNADGPFIYCELTPANAHKLNEP-IAQAQGGTLVLSHPEHLTHEQQHQLVQS----QS 240

Query: 263 LNRPRTRVIAVIDQPPEQLIAQNQLLPELYYLLNQGQIDVPLLRQRPDDIAALFHYFLKQ 322
           L R   R+I + +    +L A  +++ ELYY     QI    L +RPDDI  LFH++L++
Sbjct: 241 LERRPFRLIGIGNASLVELAASGRIVAELYYCFAMTQIACLPLSKRPDDIEPLFHHYLQK 300

Query: 323 SCYKLGKPMPNVEPHYLALLRAHQWPGNVRELRNVAELYAIGIVKLAGKERLYNQEEMLS 382
           +C +L  P+P V+ H L  +    W  NVREL N AEL+A+G++ LA            +
Sbjct: 301 TCQRLNHPVPEVDSHLLKGMMRRVWLNNVRELANAAELFAVGVLPLADTVNPQMHVGEPT 360

Query: 383 PLDELVDDYEKQVIEDALFLFSGRVADAANYLQVPRKKLYLRMKKHGLEKDAFK 436
           PLD  V+D E+Q+I +AL +  GR+ + A YL +PRKKLYLRMKK+GL K+ +K
Sbjct: 361 PLDRRVEDVERQIITEALNIHQGRINEVAEYLLIPRKKLYLRMKKYGLSKEHYK 414