Pairwise Alignments

Query, 439 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 461 a.a., two-component system C4-dicarboxylate transport response regulator DctD from Paraburkholderia graminis OAS925

 Score =  196 bits (497), Expect = 2e-54
 Identities = 134/435 (30%), Positives = 231/435 (53%), Gaps = 34/435 (7%)

Query: 24  VLLIDDDQDVLDSYLHLMSIAGLTAKAVIDPTQAMSHIQPDWNGVVLLDMYMPQLHGMEL 83
           VL+++DD++V       + +AGL   A      A++ + P    V++ D+ MP + G++L
Sbjct: 7   VLVVEDDENVRFGVQQAVELAGLPVSAYAGAADALAEVAPGAPLVIVSDVRMPGIDGLQL 66

Query: 84  LKQIKAVDDKIPVIVITGHGDIPMAVEAVKMGACDFLEKPINPPQLLTLIKQHLELRRSF 143
           L ++ A+D +IPV++I+GH DI  AV A+++GA DF+EKP +   +   + + +E RR  
Sbjct: 67  LDKVMAIDPQIPVVLISGHADISTAVGAMQVGAYDFIEKPFSSDHIARRVARAVEKRRLT 126

Query: 144 IEQKLLLS-----RSVKRELVGKSAQMEQIRSHVAQYALLNRHVVIVGESGCGRHTIAYL 198
           +E + L +     + ++  ++GKS  + ++R  + + A  +  V+I GE+G G+  IA  
Sbjct: 127 LEVQGLRAALDNWQGIEALVLGKSPAIAEVRKKILRLADTSVSVLITGETGTGKELIARS 186

Query: 199 IHQ---------LTTNNGHLP----WVELVASAKTEWSTVEP----KVQESAGGTLLIDH 241
           +H+         +  N G LP      EL       ++        K++ + GGTL +D 
Sbjct: 187 LHEFGARRDKHFVALNCGGLPEQIFESELFGHEAGAFTGAIKKRIGKIEWAHGGTLFLDE 246

Query: 242 IELLSEEVQRNVVQSLLNQ--ERL--NRPRT---RVIAVIDQPPEQLIAQNQLLPELYYL 294
           IE +   +Q  +++ L  +  ERL  N P +   R++A       QL  + Q   +L Y 
Sbjct: 247 IETMPVSLQIKMLRVLQERTVERLGANEPISVDCRIVAASKADLMQLSTEGQFRADLLYR 306

Query: 295 LNQGQIDVPLLRQRPDDIAALFHYFLKQSCYKLGKPMPNVEPHYLALLRAHQWPGNVREL 354
           LN  QI++P LR+R +D+  LF +F+  +  + G+P P V    L+ L  H W GNVREL
Sbjct: 307 LNVAQIELPPLRERREDVPLLFEHFVLAAARRFGQPAPIVSASQLSELMTHSWRGNVREL 366

Query: 355 RNVAELYAIGIVKLAGKERLY--NQEEMLSPLDELVDDYEKQVIEDALFLFSGRVADAAN 412
           +NVA+ + +G   L G   L           L E +  +E+ +IED L   +G VA+A+ 
Sbjct: 367 QNVADRFVLG---LTGDSLLTPGGNASKGGTLGEQLAYFERMLIEDMLRRHNGNVAEASV 423

Query: 413 YLQVPRKKLYLRMKK 427
            L +P+K LY ++++
Sbjct: 424 ELGMPKKTLYHKLRQ 438