Pairwise Alignments

Query, 1051 a.a., chitinase from Vibrio cholerae E7946 ATCC 55056

Subject, 868 a.a., glycosyl hydrolase family chitinase (RefSeq) from Shewanella sp. ANA-3

 Score =  129 bits (325), Expect = 7e-34
 Identities = 138/485 (28%), Positives = 191/485 (39%), Gaps = 126/485 (25%)

Query: 320 RVIG-YFTSWRSGDDPQAAYLVKDIPWEQLTHINYAFVSIGSDGKVN------VGDVNDP 372
           +V+G YF  W         + V  IP + LTHI Y F  I     +N       G     
Sbjct: 161 KVVGSYFVEWGVYG---RKFPVDKIPAQNLTHILYGFTPICGGNGINDSLKEIEGSFEAL 217

Query: 373 NNAAVGKE---------WPGVEIDPTLG-------FKGHFGALATYKQKY-GVKTLISIG 415
             A  G+          W  V++ P  G       +KG+FG L   KQ Y  +K L S+G
Sbjct: 218 QRACAGRADFKVAIHDPWAAVQM-PQAGVSEYSDPYKGNFGQLMALKQAYPDLKILPSVG 276

Query: 416 GWAETGGHFDANGNRVADGGFYTMTTNADGSINHAAIEKFAASAVEMIRKYKF-DGVDID 474
           GW  +   +           F    T  D          F AS  E ++ +KF DGVDID
Sbjct: 277 GWTLSDPFY-----------FLGDKTKRD---------TFVASVKEFLQTWKFFDGVDID 316

Query: 475 YEYPTSMAGAGNPDDKGFMEPRRAYLWASYQELMRVLREKLDQASAQDGHHYMLTIAAPS 534
           +E+P    G+G     G     + Y+      LMR LR  LD+ SA+ G  Y LT A  +
Sbjct: 317 WEFP---GGSGANPSLGNANDGQTYV-----TLMRELRAMLDELSAETGRSYELTSAISA 368

Query: 535 SGYLLRGMETFDVTKYLDYVNIMSYDLHGAW-NDHVGHNAALYDTGKDSELAQWNVYGTA 593
            G  +  ++     +Y+DY+ +MSYD +G W N  +GH   LY+   D      N   T 
Sbjct: 369 GGDKIAKVDYQAAQQYMDYIFLMSYDFNGGWTNTELGHQTNLYEASWDP-----NTRYTM 423

Query: 594 QYGGIGYLNTDWAYHYFRGSMPAGRINIGVPYYTRGWQGVTG--GENGLWGRAALPNQNL 651
             G    L+        +G  P G+I +G   Y RGW GV G  G N             
Sbjct: 424 DKGVKALLS--------QGVTP-GKIVVGAAMYGRGWTGVNGYSGNN------------- 461

Query: 652 CAPGTGEGEKNNCGHGATGIDNMWHDVNAAGDEMGAGSNPMWHAKNLEKGIWGSYAAAYK 711
             P TG       G    G+ +       A D MGAG    W           SYA    
Sbjct: 462 --PFTGTATGKVKGTWEAGVVDY---RQIAKDYMGAG----W-----------SYA---- 497

Query: 712 LDPTTTPLIGTYVRNYDSVAVAPWLWNAEKKVFLSTEDKQSIDVKADYVIDKEIGGIMFW 771
                          YD  A AP ++NA     ++ +D +S+  K  YV+  ++GG+  W
Sbjct: 498 ---------------YDETAEAPSVFNASTGDLITFDDARSVKAKGQYVLTNQLGGLFAW 542

Query: 772 ELAGD 776
           E+  D
Sbjct: 543 EIDAD 547



 Score = 43.1 bits (100), Expect = 9e-08
 Identities = 57/200 (28%), Positives = 83/200 (41%), Gaps = 12/200 (6%)

Query: 93  NQAPSVTLTAPLATAQVKAGEVMTLAANASDADGSVARVEFSVDG----VLVGQATKAPY 148
           N+AP     A + T    A   +  +A+    +G+++     V G    +       A  
Sbjct: 570 NKAPIANAGADI-TVTGTADVTLNGSASRDPENGALSYQWSQVSGPSLSISNADMANAVV 628

Query: 149 SASWTATKGTHEFSAVAFDDKGAVSTKNAVTLTVSDAGPANQAPTVAVALSASSVDVGTV 208
             S  A+   + FS    D +G  ST + VTLT   A  ANQAP V V  S + V+ G  
Sbjct: 629 QLSEAASDVVYVFSLQVTDPEGLSST-DTVTLT-HKAETANQAPVVTVPASVT-VEAGQS 685

Query: 209 VTLSAEAADADGSVEKVDFYV--GGALVGTSAKAPYTLNYTATKAGSLAVYARATDNLGA 266
           V+++A A DADG      + V  G A  G +         T T++   ++    +D  GA
Sbjct: 686 VSINATATDADGDSLTYAWTVPSGVAASGQNTATLVVTAPTVTQSTQYSLSVLVSD--GA 743

Query: 267 ATDSALTTLVVNGVAPVANC 286
              SA  TL V   A    C
Sbjct: 744 LDASAALTLSVTPKATGGQC 763



 Score = 36.2 bits (82), Expect = 1e-05
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 3/51 (5%)

Query: 33  DCSTLPEWQSSAVYTGGAKVQHKGNAYQANYWTQNNDPETFSGNYAQWKLL 83
           + +  P W ++++Y     V +    ++A YWTQ N P   S    QW+LL
Sbjct: 769 NAANYPAWNATSIYNTDDTVSYNQLVWKAKYWTQGNTP---SRTADQWQLL 816



 Score = 35.8 bits (81), Expect = 1e-05
 Identities = 12/31 (38%), Positives = 17/31 (54%)

Query: 40  WQSSAVYTGGAKVQHKGNAYQANYWTQNNDP 70
           W +   Y GGA   + G  +QA YWT+ + P
Sbjct: 823 WDAGVAYNGGATTSYNGRQWQAKYWTKGDVP 853