Pairwise Alignments

Query, 642 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1247 a.a., sensory box/GGDEF domain/EAL domain protein from Pseudomonas fluorescens FW300-N2E2

 Score =  167 bits (423), Expect = 3e-45
 Identities = 107/302 (35%), Positives = 156/302 (51%), Gaps = 22/302 (7%)

Query: 349 KNSLDSKLARAAM---DGMSAVVITDRQNRIIKVNNEFTRLSGYTFEDVKGKQPSIFASG 405
           ++ +  KL +AA         V+ITD Q  I  VN  FT ++GY+  +  G  P + ASG
Sbjct: 674 RHLMQEKLQQAATVFESTAEGVLITDTQQHISAVNRAFTEITGYSETEALGHTPRLLASG 733

Query: 406 LHKVEFYMQMWKALQDNGVWEGEVINKRKDGESITEILRIQSIRDEDNVIQFYVASFVDI 465
           LH   FY  MW  L   G W+GE+ N+RK+GE     L I ++R+ D  I  +VA F DI
Sbjct: 734 LHDSAFYAAMWHQLTAEGHWQGEISNRRKNGELYPSWLTISAVRNRDRQITHFVAVFADI 793

Query: 466 SHRKALENRLRELSEKDALTDLWNRRKFDQTISLECAKRRRYPDQAQSCLAIIDIDHFKR 525
           S  K  + RL   +  D LT L NR  F+    L  A   +  + +Q  +  +D+D FK 
Sbjct: 794 SSLKHAQARLDYQAHHDPLTGLPNRTLFES--RLLAALNGQQENGSQGAVLFLDLDRFKH 851

Query: 526 INDKFGHNEGDLVLRTVAKGIQDQLRESDFIARIGGEEFAIIFP-YTSIEEAEQVLNRVR 584
           IND  GH  GDL+L+ +A  +++QLR+ D +AR+GG+EF I+ P      +AE +  ++ 
Sbjct: 852 INDSLGHPVGDLLLKGIAVRLREQLRDIDTVARLGGDEFIILLPGLQQPSDAEHIAQKLL 911

Query: 585 LHIAS-----LHHQQVTLSGGVT-------DVCTSPDQSYKRADLALYESKTSGRNQISV 632
              A+      H   ++ S G +       DV T      K AD A+Y SK  GRN++  
Sbjct: 912 NCFAAPFQAGEHEFFISASIGTSLYPQDGCDVAT----LVKNADAAMYRSKAKGRNRVES 967

Query: 633 LT 634
            T
Sbjct: 968 YT 969