Pairwise Alignments

Query, 642 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 946 a.a., Sensory box/GGDEF family protein from Pseudomonas fluorescens FW300-N2E2

 Score =  121 bits (304), Expect = 1e-31
 Identities = 81/296 (27%), Positives = 148/296 (50%), Gaps = 15/296 (5%)

Query: 349 KNSLDSKLARAAMDGMSAVVITDRQNRIIKVNNEFTRLSGYTFEDVKGKQPSIFASGLHK 408
           +  L + +  AA +G   +VI D    ++  N  FTR++G+  +D+ G+           
Sbjct: 389 QRQLAATVFEAASEG---IVIFDPHYVLLAANQAFTRVTGFNIDDMLGRNVVDLPCSRDA 445

Query: 409 VEFYMQMWKALQDNGVWEGEVINKRKDGESITEILRIQSIRDEDNVIQFYVASFVDISHR 468
              Y  + +AL+ +G W+GE++  R +GE   + L++  +R+    +   V  F D+S R
Sbjct: 446 RRHYPVIRQALKQHGTWQGELVEARANGELYPQWLQLNVVRNARGNVSHIVGFFADLSAR 505

Query: 469 KALENRLRELSEKDALTDLWNRRKFDQTISLECAKRRRYPDQAQSCLAIIDIDHFKRIND 528
           +  E R+R L+  D LT L NR  F + +  E  +R R   +    L  I++D FK +ND
Sbjct: 506 RESEERMRYLTHYDELTGLANRSLFRERLH-EAHQRVRQGGRRSLALLHINLDRFKLLND 564

Query: 529 KFGHNEGDLVLRTVAKGIQDQLRESDFIARIGGEEFAIIF-PYTSIEEAEQVLNRVRLHI 587
             GH+  D +L+ +A+ + + L E+D IAR+ G+EFA++F  Y ++    +V  R+   +
Sbjct: 565 SLGHDIADQLLQKMARRLINALPEADTIARLSGDEFAVLFDAYGNLSSLARVATRLAAKL 624

Query: 588 ---ASLHHQQVTLSGGVTDVCTSPDQS------YKRADLALYESKTSGRNQISVLT 634
               ++   ++ LS  +  +   PD +        +A++A+  +K  G N     T
Sbjct: 625 RVPLTIEGHELVLSASI-GISLLPDNTREVAMLVSQANMAMQHAKHLGGNNFQFYT 679