Pairwise Alignments

Query, 642 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 897 a.a., Sensory box/GGDEF family protein from Pseudomonas fluorescens FW300-N2E2

 Score =  130 bits (328), Expect = 2e-34
 Identities = 87/310 (28%), Positives = 156/310 (50%), Gaps = 15/310 (4%)

Query: 336 IAAGFAAWNINHLKNSLDSKL---ARAAMDGMSAVVITDRQNRIIKVNNEFTRLSGYTFE 392
           +A  FA    NH + +  S L    RA     +A ++ +    +  VN  FT ++ YT E
Sbjct: 323 LADQFAQVINNHNRRTATSALHLFQRAVEQSANAFLLVNCDGVVEYVNPSFTAITQYTTE 382

Query: 393 DVKGKQPSIFASGLHKVEFYMQMWKALQDNGVWEGEVINKRKDGESITEILRIQSIRDED 452
           +V G++ S   +  +  E       AL  +  W+GE  ++RK+ E     L I  +  ++
Sbjct: 383 EVHGQRLSELPALENLSELLFDAPSALAQSNSWQGEFKSRRKNLEPYWGQLSISKVYGDN 442

Query: 453 NVIQFYVASFVDISHRKALENRLRELSEKDALTDLWNRRKFDQTISLECAKRRRYPDQAQ 512
             +  Y+  + DI+  K  + R+  L+  D LT+L NR  F + +    A+    P    
Sbjct: 443 RELTHYIGIYEDITQTKLAQQRIERLAYTDNLTNLGNRPAFIRNLDERFARDSDSPIS-- 500

Query: 513 SCLAIIDIDHFKRINDKFGHNEGDLVLRTVAKGIQDQLRESDFIARIGGEEFAIIFPYTS 572
             L ++DID+FKRIND  GH  GD +L ++A+ +++ L  S  +AR    EFA++   TS
Sbjct: 501 --LLLVDIDNFKRINDSLGHQTGDKLLISLARRLRNSLSPSGSLARFASNEFAVLLDDTS 558

Query: 573 IEEAEQVLNRVRLHIAS---LHHQQVTLSGGVTDVCT-----SPDQSYKRADLALYESKT 624
           +E  +Q+ +++ + +     + +Q ++++G V   C       P    + A LAL+++K 
Sbjct: 559 LEAGQQIASQLLMTLDKPMFVDNQLISVTGSVGLACAPLHGRDPQTLMRNAGLALHKAKA 618

Query: 625 SGRNQISVLT 634
           +G++Q+ V T
Sbjct: 619 NGKHQVQVFT 628