Pairwise Alignments

Query, 642 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 361 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

 Score =  139 bits (351), Expect = 2e-37
 Identities = 97/307 (31%), Positives = 150/307 (48%), Gaps = 19/307 (6%)

Query: 342 AWNINHLKNSLDSKL--------ARAAMDGMSAVVITDRQNRIIKVNNEFTRLSGYTFED 393
           +W     + +LD +L        A         +++ D   R+I VN  FTRL+GY  E+
Sbjct: 44  SWPATRDEGALDRRLHTLCPELAATVFSHAREGIILVDPYGRVISVNEAFTRLTGYGQEE 103

Query: 394 VKGKQPSIFASGLHKVEFYMQMWKALQDNGVWEGEVINKRKDGESITEILRIQSIRDEDN 453
           VKG++ +          FY  M  AL  +G W GEV +  KDG  +T  + I ++ D   
Sbjct: 104 VKGRELNSHRMVRRLAAFYAPMKNALDFHGHWSGEVQSHHKDGREMTSRISISAVHDRHG 163

Query: 454 VIQFYVASFVDISHRKALENRLRELSEKDALTDLWNRRKFDQTISLECAKRRRYPDQAQS 513
            +Q YVA   D++  K     L   +  DALT L NR    + +     K R +  Q + 
Sbjct: 164 NVQHYVALLSDMTQVKQRLQLLERDARYDALTQLPNRLLLAERMRQALGKARIH--QHKV 221

Query: 514 CLAIIDIDHFKRINDKFGHNEGDLVLRTVAKGIQDQLRESDFIARIGGEEF-AIIFPYTS 572
            +A ID+D FK +ND +GH+ GD VL+ VA  I   LRE D +AR+GG+EF A +    +
Sbjct: 222 AIAFIDLDGFKALNDSYGHDWGDRVLQIVATRINATLREGDTLARLGGDEFVAGLVGLQA 281

Query: 573 IEEAEQVLNRVRLH-----IASLHHQQVTLSGGVT---DVCTSPDQSYKRADLALYESKT 624
           +E++E +L R+        +      ++  S GV    +     D    +AD A+Y SK 
Sbjct: 282 VEDSEPLLKRMLAAANAPILIGAQTVEIAASIGVAFFPEHGLEVDGLISKADQAMYLSKK 341

Query: 625 SGRNQIS 631
           +G N+++
Sbjct: 342 AGGNRLA 348